RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 KLRG1Q96E93 195 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SLC10A4Q96EP9 437 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PLEKHF1Q96S99 279 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 USB1Q9BQ65 265 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 RHOXF2Q9BQY4 288 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 FOXP3Q9BZS1 431 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PAIP1Q9H074 479 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CNTD2Q9H8S5 307 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 ARMT1Q9H993 441 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PAPPA2Q9BXP8 1791 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 AGRPO00253 132 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TEX28O15482 410 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 FFAR2O15552 330 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 MGEA5O60502 916 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 IGFALSP35858 605 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PSMA6P60900 246 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TGFB2P61812 414 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 MAPK7Q13164 816 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TUBA3CQ13748 450 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 COG2Q14746 738 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 WDR43Q15061 677 aaKnown RBP eCLIP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CNN3Q15417 329 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 ODF2Q5BJF6 829 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 IYDQ6PHW0 289 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CCDC121Q6ZUS5 278 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SH3BP5LQ7L8J4 393 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 REXO1Q8N1G1 1221 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PRR18Q8N4B5 295 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 DNAJB8Q8NHS0 232 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 GRIN3AQ8TCU5 1115 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 JADE3Q92613 823 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 MYO19Q96H55 970 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 EMILIN2Q9BXX0 1053 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 MIR1-1HGQ9H1L0 117 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 A0A0U1RQK1 487 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 ZNF320A2RRD8 509 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 ATXN7O15265 892 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TRPA1O75762 1119 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CRTAMO95727 393 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 KELP23276 732 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TCF7P36402 384 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CASP5P51878 434 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SLC12A3P55017 1021 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PSMC6P62333 389 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 EXOSC9Q06265 439 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TMEM62Q0P6H9 643 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SLC14A1Q13336 389 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 LASP1Q14847 261 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 CORO6Q6QEF8 472 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 NCCRP1Q6ZVX7 275 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 GATAD2AQ86YP4 633 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TMEM102Q8N9M5 508 aaPredicted RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 TRAPPC12Q8WVT3 735 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 MTMR9Q96QG7 549 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 AARSD1Q9BTE6 412 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 THUMPD2Q9BTF0 503 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 EIF2B3Q9NR50 452 aaKnown RBP6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 NDFIP2Q9NV92 336 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 SAMD15Q9P1V8 674 aa6.17□□□□□ -1.42
CTDSPL2-206ENST00000559175 PRR36Q9H6K5 1346 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 GNAT3A8MTJ3 354 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 METTL12A8MUP2 240 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ACSL4O60488 711 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 NEMFO60524 1076 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 TSPAN1O60635 241 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 KCNJ13O60928 360 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 GLRX3O76003 335 aaKnown RBP6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 TP53P04637 393 aaPredicted RBP6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 RPS2P15880 293 aaKnown RBP6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 HNMTP50135 292 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 USP39Q53GS9 565 aaKnown RBP6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ATAT1Q5SQI0 421 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ZMYM1Q5SVZ6 1142 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 USP51Q70EK9 711 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 NEK11Q8NG66 645 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 OR6P1Q8NGX9 317 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 LPIN2Q92539 896 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 MFSD14AQ96MC6 490 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 NUP88Q99567 741 aaPredicted RBP6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 AGXT2Q9BYV1 514 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 C2orf40Q9H1Z8 148 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ATPIF1Q9UII2 106 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 PCDHGC5Q9Y5F6 944 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 UBXN7O94888 489 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 FTCDO95954 541 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 CFBP00751 764 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 INHAP05111 366 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 HEXBP07686 556 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ACRP10323 421 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 ITGA6P23229 1130 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 VPS41P49754 854 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 CTAG1AP78358 180 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 TDGQ13569 410 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 LINC01559Q495D7 138 aa6.16□□□□□ -1.42
CTDSPL2-206ENST00000559175 AGMOQ6ZNB7 445 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms