RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PRR23AA6NEV1 266 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 MYMKA6NI61 221 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TRAPPC3O43617 180 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ECI2O75521 394 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 MICAL2O94851 1124 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 RHOP08100 348 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 CLTAP09496 248 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 OR4Q2P0C623 313 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 HARSP12081 509 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 CEBPBP17676 345 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 PTPN2P17706 415 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ADSSP30520 456 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 UBA7P41226 1012 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 SMTNP53814 917 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 KCNA1Q09470 495 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 STRN3Q13033 797 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 DHX8Q14562 1220 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 PABPC1LQ4VXU2 614 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 LIN9Q5TKA1 542 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 SPATA1Q5VX52 437 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TPGS2Q68CL5 300 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 RNF19BQ6ZMZ0 732 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ZNF720Q7Z2F6 126 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 FRMD5Q7Z6J6 570 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TMC8Q8IU68 726 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 MYCT1Q8N699 235 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ZSWIM2Q8NEG5 633 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 LARP4BQ92615 738 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 RSPRY1Q96DX4 576 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TCEAL4Q96EI5 215 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 KXD1Q9BQD3 176 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 RTP3Q9BQQ7 232 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 MKNK1Q9BUB5 465 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 FGFBP2Q9BYJ0 223 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 BACH2Q9BYV9 841 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 DNAJC25Q9H1X3 360 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TBC1D17Q9HA65 648 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 PARVGQ9HBI0 331 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 ARHGEF3Q9NR81 526 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 MTMR6Q9Y217 621 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 SRPRBQ9Y5M8 271 aaKnown RBP6.04□□□□□ -1.44
SMAD3-209ENST00000558894 INSL5Q9Y5Q6 135 aa6.04□□□□□ -1.44
SMAD3-209ENST00000558894 GVINP1Q7Z2Y8 2422 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 FRMD3A2A2Y4 597 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 K7ENM7 598 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 ARNTLO00327 626 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 HNRNPDLO14979 420 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 OGTO15294 1046 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 GFRA3O60609 400 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 XYLBO75191 536 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 BMP15O95972 392 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 DCNP07585 359 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 NFICP08651 508 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 SCP2P22307 547 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 MARCKSP29966 332 aaPredicted RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 MCM4P33991 863 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 HOXD13P35453 343 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 ACOT2P49753 483 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CASP5P51878 434 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 LILRA4P59901 499 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 ADCY1Q08828 1119 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 GPR17Q13304 367 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 SNW1Q13573 536 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 SLC39A14Q15043 492 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 ANGPT1Q15389 498 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 E2F4Q16254 413 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CTXN3Q4LDR2 81 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 SLC44A4Q53GD3 710 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 FAM78AQ5JUQ0 283 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 C9orf57Q5W0N0 161 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 TANGO2Q6ICL3 276 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 JADE1Q6IE81 842 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CENPPQ6IPU0 288 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 EFCAB13Q8IY85 973 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 HS6ST3Q8IZP7 471 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 PJA1Q8NG27 643 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 OR10T2Q8NGX3 314 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 ING5Q8WYH8 240 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 NELL1Q92832 810 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 MCRS1Q96EZ8 462 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CALML4Q96GE6 196 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 INTS4Q96HW7 963 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CDK5RAP3Q96JB5 506 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 USP28Q96RU2 1077 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 TSPAN18Q96SJ8 248 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 TMEM209Q96SK2 561 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 FOXQ1Q9C009 403 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 IRF2BPLQ9H1B7 796 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 MFSD1Q9H3U5 465 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 CYP4F11Q9HBI6 524 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 GDE1Q9NZC3 331 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 AFF4Q9UHB7 1163 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 FBXL21Q9UKT6 434 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 MAFFQ9ULX9 164 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 UBQLN1Q9UMX0 589 aaKnown RBP6.03□□□□□ -1.44
SMAD3-209ENST00000558894 POLIQ9UNA4 740 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 NUB1Q9Y5A7 615 aa6.03□□□□□ -1.44
SMAD3-209ENST00000558894 FLNBO75369 2602 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms