RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 FSCN1Q16658 493 aaKnown RBP7.12□□□□□ -1.27
LRRC28-209ENST00000558861 PITRM1Q5JRX3 1037 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 TTC22Q5TAA0 569 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 FKBP1CQ5VVH2 108 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-209ENST00000558861 CDC42EP5Q6NZY7 148 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 PGM2L1Q6PCE3 622 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 DLK2Q6UY11 383 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 ATG14Q6ZNE5 492 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 ZBTB46Q86UZ6 589 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 TICAM2Q86XR7 235 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 FNIP1Q8TF40 1166 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 TEKT1Q969V4 418 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 CHMP4CQ96CF2 233 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 FUBP3Q96I24 572 aaKnown RBP eCLIP7.12□□□□□ -1.27
LRRC28-209ENST00000558861 FAM84AQ96KN4 292 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 IDI2Q9BXS1 227 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 DDX4Q9NQI0 724 aaKnown RBP7.12□□□□□ -1.27
LRRC28-209ENST00000558861 GGA3Q9NZ52 723 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 ZNF70Q9UC06 446 aaPredicted RBP7.12□□□□□ -1.27
LRRC28-209ENST00000558861 EDARQ9UNE0 448 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 MAST2Q6P0Q8 1798 aa7.12□□□□□ -1.27
LRRC28-209ENST00000558861 ZNF532Q9HCE3 1301 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 IDH1O75874 414 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 MAP4K4O95819 1239 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 LPLP06858 475 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 APEX1P27695 318 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 ADCY8P40145 1251 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 C1QTNF8P60827 252 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 SRSF2Q01130 221 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 MAP3K12Q12852 859 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 ZNF648Q5T619 568 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 SLC9C2Q5TAH2 1124 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 NAA16Q6N069 864 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 DZIP1Q86YF9 867 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 MAGEB6Q8N7X4 407 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 EVI5LQ96CN4 794 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 HOOK2Q96ED9 719 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 WRNIP1Q96S55 665 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 GLIS2Q9BZE0 524 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 QRSL1Q9H0R6 528 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 IL25Q9H293 177 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 MTG2Q9H4K7 406 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 TDRD3Q9H7E2 651 aaKnown RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 AASDHPPTQ9NRN7 309 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 SPATA6Q9NWH7 488 aaPredicted RBP7.11□□□□□ -1.27
LRRC28-209ENST00000558861 RAI14Q9P0K7 980 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 TMPRSS11EQ9UL52 423 aa7.11□□□□□ -1.27
LRRC28-209ENST00000558861 RPAP1Q9BWH6 1393 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 MYH2Q9UKX2 1941 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CLRN2A0PK11 232 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 ADM5C9JUS6 153 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 FARP2O94887 1054 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 PCDH8O95206 1070 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 PFKMP08237 780 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 RBP3P10745 1247 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 COL6A1P12109 1028 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 BTDP43251 543 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 RAB27AP51159 221 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CACNB3P54284 484 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 EPHB1P54762 984 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 MLLT6P55198 1093 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 DYNLL1P63167 89 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CD83Q01151 205 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 FSTL1Q12841 308 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 TRIM25Q14258 630 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 UGT8Q16880 541 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 TOR2AQ5JU69 321 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 OGFOD2Q6N063 350 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CNKSR3Q6P9H4 555 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 FAM83AQ86UY5 434 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 ZFPM1Q8IX07 1006 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 AMOTL1Q8IY63 956 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CNTROBQ8N137 903 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 WDR48Q8TAF3 677 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 ZCCHC14Q8WYQ9 949 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 FAXDC2Q96IV6 333 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 PWWP2AQ96N64 755 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 KCTD10Q9H3F6 313 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 DNAJC28Q9NX36 388 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 MKS1Q9NXB0 559 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 KCNG1Q9UIX4 513 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 CNOT6Q9ULM6 557 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 SCAF8Q9UPN6 1271 aaKnown RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 RNF114Q9Y508 228 aa7.1□□□□□ -1.27
LRRC28-209ENST00000558861 COL2A1P02458 1487 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-209ENST00000558861 POLR2AP24928 1970 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 A0A0D9SFI3 127 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 TCAF2A6NFQ2 919 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 TRIM75PA6NK02 468 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 RNF113AO15541 343 aaKnown RBP7.09□□□□□ -1.27
LRRC28-209ENST00000558861 AKAP10O43572 662 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 PCDHGA12O60330 932 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 CFBP00751 764 aa7.09□□□□□ -1.27
LRRC28-209ENST00000558861 KNG1P01042 644 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms