RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 MRPL10Q7Z7H8 261 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 COLGALT2Q8IYK4 626 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 RNF168Q8IYW5 571 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 BLIDQ8IZY5 108 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 C1orf127Q8N9H9 656 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 DAGLBQ8NCG7 672 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 SMG8Q8ND04 991 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 PSPC1Q8WXF1 523 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 TMEM143Q96AN5 459 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 ACDQ96AP0 544 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 CHAMP1Q96JM3 812 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 DMRTB1Q96MA1 342 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 AIFM3Q96NN9 605 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 FAM193BQ96PV7 902 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 RPS6KC1Q96S38 1066 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 RTP3Q9BQQ7 232 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 JPH2Q9BR39 696 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 OXCT2Q9BYC2 517 aaPredicted RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 C22orf23Q9BZE7 217 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 IGSF9Q9P2J2 1179 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 DDX25Q9UHL0 483 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 FAN1Q9Y2M0 1017 aa10.76□□□□□ -0.69
SPG11-212ENST00000558790 PDCD11Q14690 1871 aaKnown RBP10.76□□□□□ -0.69
SPG11-212ENST00000558790 CITO14578 2027 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 CCDC195A0A1B0GUA6 201 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 EFEMP2O95967 443 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 SRGAP2CP0DJJ0 459 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 NCLP19338 710 aaKnown RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 ADH6P28332 368 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 QARSP47897 775 aaKnown RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 GLUD2P49448 558 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 EVCP57679 992 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 DSC1Q08554 894 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 PPP2R5CQ13362 524 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 TOB2Q14106 344 aaPredicted RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 EMC2Q15006 297 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 INF2Q27J81 1249 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 TTC39BQ5VTQ0 682 aaPredicted RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 XKR5Q6UX68 686 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 RIN2Q8WYP3 895 aaPredicted RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 ZNF707Q96C28 371 aaPredicted RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 CEP170P1Q96L14 293 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 MYADMQ96S97 322 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 LXNQ9BS40 222 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 EIF2AQ9BY44 585 aaKnown RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 TBC1D17Q9HA65 648 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 WDR6Q9NNW5 1121 aaKnown RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 SH2B1Q9NRF2 756 aaPredicted RBP10.75□□□□□ -0.69
SPG11-212ENST00000558790 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 EPS15L1Q9UBC2 864 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 CA14Q9ULX7 337 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 HES2Q9Y543 173 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 IPPQ9Y573 584 aa10.75□□□□□ -0.69
SPG11-212ENST00000558790 ARL5CA6NH57 179 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 TSPAN1O60635 241 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 ERLIN2O94905 339 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 DEXIO95424 95 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 ALDH2P05091 517 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 ADRB1P08588 477 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 SRFP11831 508 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 ITGA4P13612 1032 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 OR1G1P47890 313 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 SCNN1GP51170 649 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 SSRP1Q08945 709 aaKnown RBP10.74□□□□□ -0.69
SPG11-212ENST00000558790 NONOQ15233 471 aaKnown RBP eCLIP10.74□□□□□ -0.69
SPG11-212ENST00000558790 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 GET4Q7L5D6 327 aaPredicted RBP10.74□□□□□ -0.69
SPG11-212ENST00000558790 RNF149Q8NC42 400 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 SMG7Q92540 1137 aaKnown RBP10.74□□□□□ -0.69
SPG11-212ENST00000558790 STAMQ92783 540 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 B3GALT6Q96L58 329 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 GAD1Q99259 594 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 KCNMB3Q9NPA1 279 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 WNT16Q9UBV4 365 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 F5P12259 2224 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 LAMA5O15230 3695 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 TICRRQ7Z2Z1 1910 aa10.74□□□□□ -0.69
SPG11-212ENST00000558790 COL4A2P08572 1712 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 LAMA1P25391 3075 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 PHACTR2O75167 634 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 SIN3BO75182 1162 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 MAP3K6O95382 1288 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 PAPLNO95428 1278 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 YWHABP31946 246 aaKnown RBP10.73□□□□□ -0.69
SPG11-212ENST00000558790 DSG1Q02413 1049 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 SPECC1Q5M775 1068 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 KIAA0319Q5VV43 1072 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 NOTUMQ6P988 496 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 ELMSAN1Q6PJG2 1045 aa10.73□□□□□ -0.69
SPG11-212ENST00000558790 C1orf229Q6ZS94 237 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms