RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SLITRK6Q9H5Y7 841 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ZSWIM4Q9H7M6 989 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 KCNMB3Q9NPA1 279 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ANO2Q9NQ90 1003 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SH3GLB2Q9NR46 395 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 ASAH2Q9NR71 780 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 RGL1Q9NZL6 768 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 CEP72Q9P209 647 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 SDK1Q7Z5N4 2213 aa7.45□□□□□ -1.22
LRRC28-207ENST00000558500 MTCL1Q9Y4B5 1905 aaKnown RBP7.44□□□□□ -1.22
LRRC28-207ENST00000558500 NOTCH4Q99466 2003 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 NBEAQ8NFP9 2946 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 LNP1A1A4G5 178 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 M0R2N6 131 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 N4BP3O15049 544 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 HYAL3O43820 417 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-207ENST00000558500 DGAT1O75907 488 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 CAVIN2O95810 425 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 PRKCBP05771 671 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 CYP4A11Q02928 519 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 CREB5Q02930 508 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 TWF1Q12792 350 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 CTTNQ14247 550 aaKnown RBP7.44□□□□□ -1.22
LRRC28-207ENST00000558500 ELF2Q15723 593 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 NTRK3Q16288 839 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 UPP1Q16831 310 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 ADCK5Q3MIX3 580 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 ARHGAP29Q52LW3 1261 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 TPGS2Q68CL5 300 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 KIAA1211LQ6NV74 962 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 CAMKK1Q8N5S9 505 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 C3orf58Q8NDZ4 430 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 ZFYVE19Q96K21 471 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 FAM20AQ96MK3 541 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 UROC1Q96N76 676 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 LRRC3BQ96PB8 259 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 PPP1R10Q96QC0 940 aaKnown RBP7.44□□□□□ -1.22
LRRC28-207ENST00000558500 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 SLC26A6Q9BXS9 759 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 FZD8Q9H461 694 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 TMEM9BQ9NQ34 198 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 PRMT7Q9NVM4 692 aaPredicted RBP7.44□□□□□ -1.22
LRRC28-207ENST00000558500 GTSE1Q9NYZ3 720 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 PCDHA4Q9UN74 947 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 SLC8A2Q9UPR5 921 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 MSRB2Q9Y3D2 182 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 NID2Q14112 1375 aa7.44□□□□□ -1.22
LRRC28-207ENST00000558500 PPP1R3GB7ZBB8 358 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 H7C4K7 107 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 TK2O00142 265 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 CDX4O14627 284 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 SYN3O14994 580 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 ATG13O75143 517 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 RHOBTB1O94844 696 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 SLITRK3O94933 977 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 LYPLA2O95372 231 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 IFNAR1P17181 557 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 FGD1P98174 961 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 KARSQ15046 597 aaKnown RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 FAM187BQ17R55 369 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 INF2Q27J81 1249 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 GLRA4Q5JXX5 417 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 DMRTA1Q5VZB9 504 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 CDCA2Q69YH5 1023 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 NCAPH2Q6IBW4 605 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 PPP4R3AQ6IN85 833 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 HAUS6Q7Z4H7 955 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 NOSTRINQ8IVI9 506 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 ARID3BQ8IVW6 561 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 TPH2Q8IWU9 490 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 BLIDQ8IZY5 108 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 DEFB124Q8NES8 71 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 HAS1Q92839 578 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 BRF1Q92994 677 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 TMEM209Q96SK2 561 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 POLR3FQ9H1D9 316 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 GOLGA2P5Q9HBQ8 144 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 PLSCR2Q9NRY7 297 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 POLR3BQ9NW08 1133 aaPredicted RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 AFF4Q9UHB7 1163 aaKnown RBP7.43□□□□□ -1.22
LRRC28-207ENST00000558500 FBXL5Q9UKA1 691 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 KLK13Q9UKR3 277 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 MAFFQ9ULX9 164 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 GDAQ9Y2T3 454 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 DMXL2Q8TDJ6 3036 aa7.43□□□□□ -1.22
LRRC28-207ENST00000558500 LAMA5O15230 3695 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 A0A1W2PRU2 124 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 LRRIQ4A6NIV6 560 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 KHNYNO15037 678 aaKnown RBP7.42□□□□□ -1.22
LRRC28-207ENST00000558500 DCLK1O15075 740 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 CAPNS1P04632 268 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
LRRC28-207ENST00000558500 SOX4Q06945 474 aaPredicted RBP7.42□□□□□ -1.22
LRRC28-207ENST00000558500 TNK2Q07912 1038 aa7.42□□□□□ -1.22
LRRC28-207ENST00000558500 PRPF4BQ13523 1007 aaKnown RBP7.42□□□□□ -1.22
LRRC28-207ENST00000558500 KRT32Q14532 448 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms