RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MFSD14AQ96MC6 490 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ASB2Q96Q27 587 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 POP1Q99575 1024 aaKnown RBP13.34□□□□□ -0.27
SMAD3-205ENST00000558428 TSG101Q99816 390 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 CLSTN2Q9H4D0 955 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 ITGA11Q9UKX5 1188 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 AGAP1Q9UPQ3 857 aa13.34□□□□□ -0.27
SMAD3-205ENST00000558428 R3HCC1Q9Y3T6 440 aaKnown RBP13.34□□□□□ -0.27
SMAD3-205ENST00000558428 SPDYE4A6NLX3 237 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 H7C4K7 107 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 PSMA7O14818 248 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 SPTLC1O15269 473 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 BMP6P22004 513 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 PPP1R2P41236 205 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 PNPLA4P41247 253 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 RBP5P82980 135 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 SV2CQ496J9 727 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 CENPPQ6IPU0 288 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 KLHL10Q6JEL2 608 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-205ENST00000558428 PLEKHO2Q8TD55 490 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 MSLNLQ96KJ4 702 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 SENP8Q96LD8 212 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 CLSTN3Q9BQT9 956 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 DZANK1Q9NVP4 752 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 MTRRQ9UBK8 725 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 SIX4Q9UIU6 781 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
SMAD3-205ENST00000558428 BACE2Q9Y5Z0 518 aa13.33□□□□□ -0.28
SMAD3-205ENST00000558428 TSC2P49815 1807 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 ARHGEF37A1IGU5 675 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 LRRIQ3A6PVS8 624 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CETN3O15182 167 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 ADAM12O43184 909 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 TGM5O43548 720 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 AKAP3O75969 853 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 ODC1P11926 461 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 HOXB8P17481 243 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CCNE1P24864 410 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 OR1D2P34982 312 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 PSMC2P35998 433 aaKnown RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 PMS1P54277 932 aaKnown RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 BFSP1Q12934 665 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 MRPL58Q14197 206 aaKnown RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 PUS10Q3MIT2 529 aaKnown RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CTXN3Q4LDR2 81 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 TJAP1Q5JTD0 557 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 ANKRD40Q6AI12 368 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 PTCRAQ6ISU1 281 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 ZNF280DQ6N043 979 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 USP37Q86T82 979 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 FAM186BQ8IYM0 893 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 LRRC52Q8N7C0 313 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 TRIML1Q8N9V2 468 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 SMRP1Q8NCR6 262 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CXorf38Q8TB03 319 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 GPT2Q8TD30 523 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 DHTKD1Q96HY7 919 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 APOL5Q9BWW9 433 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 GZF1Q9H116 711 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-205ENST00000558428 MAN1C1Q9NR34 630 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 CDY1Q9Y6F8 540 aa13.32□□□□□ -0.28
SMAD3-205ENST00000558428 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 CYB561D2O14569 222 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 MAPK13O15264 365 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 MBTPS2O43462 519 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 KRT13P13646 458 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 TYMPP19971 482 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 ARPP19P56211 112 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 DLG4P78352 724 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 FKBP3Q00688 224 aaKnown RBP13.31□□□□□ -0.28
SMAD3-205ENST00000558428 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 MYO1EQ12965 1108 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 SMAD4Q13485 552 aaKnown RBP13.31□□□□□ -0.28
SMAD3-205ENST00000558428 OVOS1Q6IE37 1185 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 ELMSAN1Q6PJG2 1045 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 RSPO2Q6UXX9 243 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-205ENST00000558428 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 INTS8Q75QN2 995 aaKnown RBP13.31□□□□□ -0.28
SMAD3-205ENST00000558428 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-205ENST00000558428 TMC2Q8TDI7 906 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 EEF2KMTQ96G04 330 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 SFXN1Q9H9B4 322 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 DPP7Q9UHL4 492 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 FBXL5Q9UKA1 691 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 DSEQ9UL01 958 aa13.31□□□□□ -0.28
SMAD3-205ENST00000558428 CTNND2Q9UQB3 1225 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms