RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PTPRZ1P23471 2315 aaPredicted RBP16.88■□□□□ 0.29
TPM1-211ENST00000558314 ANKRD63C9JTQ0 380 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 SLC26A4O43511 780 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 ECI2O75521 394 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 LRPAP1P30533 357 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 CCR2P41597 374 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 STARD6P59095 220 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 FAM78AQ5JUQ0 283 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 OVOS1Q6IE37 1185 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 POTEHQ6S545 545 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 USP49Q70CQ1 688 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 GPIHBP1Q8IV16 184 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 C1orf210Q8IVY1 113 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 NOC3LQ8WTT2 800 aaKnown RBP16.87■□□□□ 0.29
TPM1-211ENST00000558314 CLIC6Q96NY7 704 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 IKZF4Q9H2S9 585 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 BRD9Q9H8M2 597 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 ZFP14Q9HCL3 533 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 CCDC39Q9UFE4 941 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 SLC27A5Q9Y2P5 690 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 YIPF1Q9Y548 306 aa16.87■□□□□ 0.29
TPM1-211ENST00000558314 A0A0B4J269 797 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 M0QZQ0 153 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 NRG2O14511 850 aaPredicted RBP16.86■□□□□ 0.29
TPM1-211ENST00000558314 NFICP08651 508 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 CYP3A5P20815 502 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 PDCP20941 246 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 PRKCQQ04759 706 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 DUSP4Q13115 394 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 TEAD2Q15562 447 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 PRSS36Q5K4E3 855 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 ARMCX5Q6P1M9 558 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 SLC39A4Q6P5W5 647 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 SFR1Q86XK3 245 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 ZSWIM3Q96MP5 696 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 PANK2Q9BZ23 570 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 DLGAP2Q9P1A6 1054 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 NDRG2Q9UN36 371 aaKnown RBP16.86■□□□□ 0.29
TPM1-211ENST00000558314 NOTCH4Q99466 2003 aa16.86■□□□□ 0.29
TPM1-211ENST00000558314 LAMTOR5O43504 91 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 SOAT2O75908 522 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 SP9P0CG40 484 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 ODC1P11926 461 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 DDIT3P35638 169 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 TXLNAP40222 546 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 VIPR2P41587 438 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 ALDH1A3P47895 512 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 ZNF131P52739 623 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 EPHB3P54753 998 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 ZBTB6Q15916 424 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 SPATA1Q5VX52 437 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 RRAGBQ5VZM2 374 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 MAP4K3Q8IVH8 894 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 POMGNT1Q8WZA1 660 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 ELSPBP1Q96BH3 223 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 SENP8Q96LD8 212 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 LTB4R2Q9NPC1 389 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 AVENQ9NQS1 362 aaPredicted RBP16.85■□□□□ 0.29
TPM1-211ENST00000558314 CPSF3Q9UKF6 684 aaKnown RBP16.85■□□□□ 0.29
TPM1-211ENST00000558314 USP34Q70CQ2 3546 aa16.85■□□□□ 0.29
TPM1-211ENST00000558314 OR6C75A6NL08 312 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 FAM189A1O60320 539 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 OAZ2O95190 189 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 PIGRP01833 764 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 IDEP14735 1019 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 GDI1P31150 447 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 GTF2BQ00403 316 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 CSTF1Q05048 431 aaKnown RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 ZNF852Q6ZMS4 543 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 CD302Q8IX05 232 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 ATAD1Q8NBU5 361 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 ZSCAN18Q8TBC5 510 aaPredicted RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 SMARCD2Q92925 531 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 PYM1Q9BRP8 204 aaKnown RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 TRMT61BQ9BVS5 477 aaKnown RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 CCSER1Q9C0I3 900 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 CRISPLD1Q9H336 500 aa16.84■□□□□ 0.29
TPM1-211ENST00000558314 MRPL44Q9H9J2 332 aaKnown RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 AGO2Q9UKV8 859 aaKnown RBP16.84■□□□□ 0.29
TPM1-211ENST00000558314 A0A1W2PRU2 124 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 SPTLC1O15269 473 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 LMNAP02545 664 aaKnown RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 FCARP24071 287 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 TARSP26639 723 aaKnown RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 LILRA4P59901 499 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 RESTQ13127 1097 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 PLD1Q13393 1074 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 CUL4AQ13619 759 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 PDCD11Q14690 1871 aaKnown RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 PTPAQ15257 358 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 SLC39A12Q504Y0 691 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 RIF1Q5UIP0 2472 aaKnown RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 SLFN12LQ6IEE8 588 aa16.83■□□□□ 0.28
TPM1-211ENST00000558314 ZC3H14Q6PJT7 736 aaKnown RBP16.83■□□□□ 0.28
TPM1-211ENST00000558314 SV2BQ7L1I2 683 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms