RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 FBXL13Q8NEE6 735 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 BCL7CQ8WUZ0 217 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-204ENST00000558172 POF1BQ8WVV4 589 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 HPDLQ96IR7 371 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 TUBGCP2Q9BSJ2 902 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 HERC2P3Q9BVR0 1158 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 TTYH1Q9H313 450 aaPredicted RBP11.27□□□□□ -0.61
LRRC28-204ENST00000558172 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 ALG13Q9NP73 1137 aaKnown RBP11.27□□□□□ -0.61
LRRC28-204ENST00000558172 RAB20Q9NX57 234 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 GDAP2Q9NXN4 497 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 LIMA1Q9UHB6 759 aaKnown RBP11.27□□□□□ -0.61
LRRC28-204ENST00000558172 COQ4Q9Y3A0 265 aa11.27□□□□□ -0.61
LRRC28-204ENST00000558172 LRRC10BA6NIK2 292 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 F8W810 466 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 PPEF2O14830 753 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 GRM6O15303 877 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 LPXNO60711 386 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 VNN1O95497 513 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 HLA-DRAP01903 254 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 FAM163BP0C2L3 166 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 P4HA1P13674 534 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 FGFR3P22607 806 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 PIK3CAP42336 1068 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 BRCC3P46736 316 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 CBWD6Q4V339 395 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 TIGD5Q53EQ6 642 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 HSP90AA4PQ58FG1 418 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 CBWD3Q5JTY5 395 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 CBWD5Q5RIA9 395 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 FAM171A1Q5VUB5 890 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 KIAA1841Q6NSI8 718 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 TMC7Q7Z402 723 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 VPS52Q8N1B4 723 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 APPL2Q8NEU8 664 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 HASPINQ8TF76 798 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 FAM84AQ96KN4 292 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 SENP8Q96LD8 212 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 TTPALQ9BTX7 342 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 GPR62Q9BZJ7 368 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 HSD3B7Q9H2F3 369 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 NDST4Q9H3R1 872 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 NGRNQ9NPE2 291 aaKnown RBP11.26□□□□□ -0.61
LRRC28-204ENST00000558172 TLR9Q9NR96 1032 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 CHST7Q9NS84 486 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 DSEQ9UL01 958 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 PCDHB8Q9UN66 801 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 CHD9Q3L8U1 2897 aa11.26□□□□□ -0.61
LRRC28-204ENST00000558172 PRRC2BQ5JSZ5 2229 aaKnown RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 GTPBP10A4D1E9 387 aaKnown RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 CYB561D2O14569 222 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 SPTLC1O15269 473 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 HUS1O60921 280 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 ASS1P00966 412 aaKnown RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 CYP11A1P05108 521 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 URODP06132 367 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 CTSAP10619 480 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 ODC1P11926 461 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TYMPP19971 482 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 POU3F3P20264 500 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 GLUD2P49448 558 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 MYL6P60660 151 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TNNC1P63316 161 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 MYL7Q01449 175 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 DSG1Q02413 1049 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 CREMQ03060 361 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 GRIN2CQ14957 1233 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 KRT31Q15323 416 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 WDR72Q3MJ13 1102 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 FILIP1LQ4L180 1135 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 ZNF667Q5HYK9 610 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 WDR44Q5JSH3 913 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 LUZP1Q86V48 1076 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 METTL23Q86XA0 190 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TMEM86AQ8N2M4 240 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TMEM130Q8N3G9 435 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TOP6BLQ8N6T0 577 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 SPATA18Q8TC71 538 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 MICAL1Q8TDZ2 1067 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TAS1R2Q8TE23 839 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 MRPL38Q96DV4 380 aaKnown RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 GAS2L1Q99501 681 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 VN1R3Q9BXE9 311 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 OXCT2Q9BYC2 517 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 PRDM12Q9H4Q4 367 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 MRPL17Q9NRX2 175 aaKnown RBP11.25□□□□□ -0.61
LRRC28-204ENST00000558172 IRAK3Q9Y616 596 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TSC2P49815 1807 aa11.25□□□□□ -0.61
LRRC28-204ENST00000558172 TRANK1O15050 2925 aa11.24□□□□□ -0.61
LRRC28-204ENST00000558172 EPOPA6NHQ4 379 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 1086.8 ms