RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SLC7A6OSQ96CW6 309 aaPredicted RBP12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 CSRNP1Q96S65 589 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 PPCSQ9HAB8 311 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 C1orf112Q9NSG2 853 aa12.52□□□□□ -0.41
VIPAS39-211ENST00000557658 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 DHX15O43143 795 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 TAS2R40P59535 323 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 DAB2IPQ5VWQ8 1189 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 C4orf33Q8N1A6 199 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 FBXO41Q8TF61 875 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 MRPL47Q9HD33 250 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 SERPINA10Q9UK55 444 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 T-ENOLP0DO92 83 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 NPR1P16066 1061 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 CD58P19256 250 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 EPHB2P29323 1055 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 PCK1P35558 622 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 GJC1P36383 396 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 FYB2Q5VWT5 728 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 LLGL2Q6P1M3 1020 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 TMEM161BQ8NDZ6 487 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 FBXL18Q96ME1 805 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 PI4K2AQ9BTU6 479 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 TDRD3Q9H7E2 651 aaKnown RBP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 VPS37BQ9H9H4 285 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 GRID1Q9ULK0 1009 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
VIPAS39-211ENST00000557658 LMNAP02545 664 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ATP6V1C1P21283 382 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 PTPN4P29074 926 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 CCDC125Q86Z20 511 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 AGO4Q9HCK5 861 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SPATS2LQ9NUQ6 558 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SLC24A2Q9UI40 661 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ZFP69BQ9UJL9 534 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 DENND3A2RUS2 1198 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ATP2A1O14983 1001 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 LIASO43766 372 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 CBX6O95503 412 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 PECAM1P16284 738 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 PEX19P40855 299 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SLC1A5Q15758 541 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 TSNAXIP1Q2TAA8 658 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 TAF1BQ53T94 588 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 C4orf19Q8IY42 314 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ZNF398Q8TD17 642 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 C11orf70Q9BRQ4 267 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SAR1AQ9NR31 198 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 PSMC3IPQ9P2W1 217 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 HERC5Q9UII4 1024 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ZMYND8Q9ULU4 1186 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
VIPAS39-211ENST00000557658 ASTN2O75129 1339 aaPredicted RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 C2CD2LO14523 706 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 ABLIM1O14639 778 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 NDC80O14777 642 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 GM2AP17900 193 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 NPTX2P47972 431 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 HSD17B4P51659 736 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 ARSEP51690 589 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 MRPS35P82673 323 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 RNASELQ05823 741 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 ENPEPQ07075 957 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 NFX1Q12986 1120 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 MORF4L2Q15014 288 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 RASA2Q15283 850 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 OTOAQ7RTW8 1153 aa12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 ZNF483Q8TF39 744 aaPredicted RBP12.49□□□□□ -0.41
VIPAS39-211ENST00000557658 ZNF75CPQ92670 426 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms