RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 COPB1P53618 953 aaKnown RBP16.44■□□□□ 0.22
NEDD1-213ENST00000557644 FBXL13Q8NEE6 735 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 GDPD5Q8WTR4 605 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 SAMD11Q96NU1 681 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 ANP32EQ9BTT0 268 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 RAB20Q9NX57 234 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 LRRC10BA6NIK2 292 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 CLSTN1O94985 981 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 EFEMP2O95967 443 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 RB1P06400 928 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEDD1-213ENST00000557644 PLCB3Q01970 1234 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 SPPL3Q8TCT6 385 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 ZNF560Q96MR9 790 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 C11orf84Q9BUA3 381 aaPredicted RBP16.44■□□□□ 0.22
NEDD1-213ENST00000557644 COQ4Q9Y3A0 265 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 KRT17Q04695 432 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 GPM6BQ13491 265 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 ZNF699Q32M78 642 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 POF1BQ8WVV4 589 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 FAM161BQ96MY7 647 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 APOBEC3GQ9HC16 384 aaKnown RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 TIMM13Q9Y5L4 95 aaPredicted RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 H3BNC9 293 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 PNPLA4P41247 253 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 TPM4P67936 248 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 MYO1EQ12965 1108 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 CAMK1Q14012 370 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 WDR72Q3MJ13 1102 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 SV2CQ496J9 727 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 DSTYKQ6XUX3 929 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 DDX53Q86TM3 631 aaKnown RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 RNF168Q8IYW5 571 aaPredicted RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 VPS52Q8N1B4 723 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 LMO3Q8TAP4 145 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 SUSD3Q96L08 255 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 SENP8Q96LD8 212 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 NXF1Q9UBU9 619 aaKnown RBP16.43■□□□□ 0.22
NEDD1-213ENST00000557644 POLIQ9UNA4 740 aa16.43■□□□□ 0.22
NEDD1-213ENST00000557644 PMM2O15305 246 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 N4BP1O75113 896 aaKnown RBP16.42■□□□□ 0.22
NEDD1-213ENST00000557644 TKTP29401 623 aaKnown RBP16.42■□□□□ 0.22
NEDD1-213ENST00000557644 APBA1Q02410 837 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 PTPN21Q16825 1174 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 SGSM1Q2NKQ1 1148 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 CEP57Q86XR8 500 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 NAP1L5Q96NT1 182 aaPredicted RBP16.42■□□□□ 0.22
NEDD1-213ENST00000557644 GCNT4Q9P109 453 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 PCDHGC5Q9Y5F6 944 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 REV3LO60673 3130 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 CARNS1A5YM72 827 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 CYB561D2O14569 222 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 ATICP31939 592 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 NOP14P78316 857 aaKnown RBP16.42■□□□□ 0.22
NEDD1-213ENST00000557644 LRMPQ12912 555 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 GRIN2CQ14957 1233 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 AUTS2Q8WXX7 1259 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 MYO7AQ13402 2215 aa16.42■□□□□ 0.22
NEDD1-213ENST00000557644 M0QZQ0 153 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 P4HA2O15460 535 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 TRAPPC3O43617 180 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 LPXNO60711 386 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 SERPINC1P01008 464 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 SOD2P04179 222 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 SLC9A1P19634 815 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 ERVFC1P60507 584 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 FANCCQ00597 558 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 TATDN2Q93075 761 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 VRTNQ9H8Y1 702 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 GDAP2Q9NXN4 497 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 LGALS16A8MUM7 142 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 C2CD2LO14523 706 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 TPM2P07951 284 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 IRS1P35568 1242 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 CETN1Q12798 172 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 MMS19Q96T76 1030 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 IMPG2Q9BZV3 1241 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 INTS2Q9H0H0 1204 aaKnown RBP16.41■□□□□ 0.22
NEDD1-213ENST00000557644 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
NEDD1-213ENST00000557644 L1RE1Q9UN81 338 aa16.41■□□□□ 0.22
NEDD1-213ENST00000557644 TEX33O43247 280 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 STAU1O95793 577 aaKnown RBP16.4■□□□□ 0.22
NEDD1-213ENST00000557644 EXOC3L4Q17RC7 722 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 ZNF667Q5HYK9 610 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 ZNF697Q5TEC3 545 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 WSCD1Q658N2 575 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 Q7L0L9 218 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 EHBP1Q8NDI1 1231 aa16.4■□□□□ 0.22
NEDD1-213ENST00000557644 ZBP1Q9H171 429 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms