RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 LTBRP36941 435 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 AARSP49588 968 aaKnown RBP eCLIP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 TAF6P49848 677 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 LILRA4P59901 499 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 DLX2Q07687 328 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 ADAM9Q13443 819 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 DUOXA2Q1HG44 320 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 AAK1Q2M2I8 961 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 SV2CQ496J9 727 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 VARS2Q5ST30 1063 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 CENPPQ6IPU0 288 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 ANKS3Q6ZW76 656 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 GPR65Q8IYL9 337 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 CSGALNACT2Q8N6G5 542 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 TRIML1Q8N9V2 468 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 LNX1Q8TBB1 728 aaPredicted RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 CASP10Q92851 521 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 EEF2KMTQ96G04 330 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 MFSD14AQ96MC6 490 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 POP1Q99575 1024 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 RXFP1Q9HBX9 757 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 FNIP2Q9P278 1114 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 MTRRQ9UBK8 725 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 CTNND2Q9UQB3 1225 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 OBSL1O75147 1896 aa11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 ZNF638Q14966 1978 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-232ENST00000557442 GREB1Q4ZG55 1949 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 LRRIQ3A6PVS8 624 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 M0QZQ0 153 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 SPTLC1O15269 473 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 AKAP3O75969 853 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CLSTN1O94985 981 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 MBD3O95983 291 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 GLUD1P00367 558 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 ODC1P11926 461 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PAX3P23760 479 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CCNE1P24864 410 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PNPLA4P41247 253 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 KCNQ1P51787 676 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CLCN4P51793 760 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PMS1P54277 932 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 YWHAHQ04917 246 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 BFSP1Q12934 665 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 KCNC3Q14003 757 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 ANKRD40Q6AI12 368 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 ZNF280DQ6N043 979 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 USP37Q86T82 979 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PALB2Q86YC2 1186 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 FAM186BQ8IYM0 893 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 APPL2Q8NEU8 664 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PLEKHO2Q8TD55 490 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 PARD3BQ8TEW8 1205 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 SLC22A17Q8WUG5 538 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 ATXN2LQ8WWM7 1075 aaKnown RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 NELFBQ8WX92 580 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 DHTKD1Q96HY7 919 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 SENP8Q96LD8 212 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 GZF1Q9H116 711 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CLEC1BQ9P126 229 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 SIX4Q9UIU6 781 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CD207Q9UJ71 328 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 TIMM13Q9Y5L4 95 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 CDY1Q9Y6F8 540 aa11.41□□□□□ -0.58
HNRNPC-232ENST00000557442 BDP1A6H8Y1 2624 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 BICDL2A1A5D9 508 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 ARHGEF37A1IGU5 675 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 KPNA7A9QM74 516 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 H7C4K7 107 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 CETN3O15182 167 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 MAPK13O15264 365 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 EPB41P11171 864 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 KRT13P13646 458 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 PSMC2P35998 433 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 VAMP7P51809 220 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 DLG4P78352 724 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 MRPS5P82675 430 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 RBP5P82980 135 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 MYO1EQ12965 1108 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 PAK1Q13153 545 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 BIRC3Q13489 604 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 LEXMQ3ZCV2 418 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 CTXN3Q4LDR2 81 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 ANKRD54Q6NXT1 300 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 ELMSAN1Q6PJG2 1045 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 TMEM184AQ6ZMB5 413 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 INTS8Q75QN2 995 aaKnown RBP11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 LRRC52Q8N7C0 313 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 CXorf38Q8TB03 319 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 APOL5Q9BWW9 433 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 MAN1C1Q9NR34 630 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 DZANK1Q9NVP4 752 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 BACE2Q9Y5Z0 518 aa11.4□□□□□ -0.58
HNRNPC-232ENST00000557442 NOTCH4Q99466 2003 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms