RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 FAM163BP0C2L3 166 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 TKTP29401 623 aaKnown RBP8.48□□□□□ -1.05
PSEN1-222ENST00000557356 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
PSEN1-222ENST00000557356 ZP2Q05996 745 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 ENPEPQ07075 957 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 SPAG1Q07617 926 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 STK4Q13043 487 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 STIM1Q13586 685 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 PSMD6Q15008 389 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 SNRNP35Q16560 246 aaKnown RBP8.48□□□□□ -1.05
PSEN1-222ENST00000557356 PPM1LQ5SGD2 360 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 ZBTB41Q5SVQ8 909 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 CD300LGQ6UXG3 332 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 OTOP3Q7RTS5 596 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 GRAMD1CQ8IYS0 662 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 TMEM86AQ8N2M4 240 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 CSGALNACT2Q8N6G5 542 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 ENGASEQ8NFI3 743 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 HPS3Q969F9 1004 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 SMARCE1Q969G3 411 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 B3GALT6Q96L58 329 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 SENP8Q96LD8 212 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 C1QTNF1Q9BXJ1 281 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 PRKD2Q9BZL6 878 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 INTS13Q9NVM9 706 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.48□□□□□ -1.05
PSEN1-222ENST00000557356 CACNG4Q9UBN1 327 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 TUBGCP4Q9UGJ1 667 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 TRAF3IP3Q9Y228 551 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 CDY1Q9Y6F8 540 aa8.48□□□□□ -1.05
PSEN1-222ENST00000557356 ZFP37Q9Y6Q3 630 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-222ENST00000557356 LOC730098B7Z3J9 87 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 CYB561D2O14569 222 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 PRRG1O14668 218 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 IKBKBO14920 756 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TBC1D4O60343 1298 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 HUS1O60921 280 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 ABLIM3O94929 683 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 CYP11A1P05108 521 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 KRT19P08727 400 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 ATF2P15336 505 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 RPL17P18621 184 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TNNI1P19237 187 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 CASP1P29466 404 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 ATICP31939 592 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 HOXD13P35453 343 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 CYP2J2P51589 502 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 UBE2HP62256 183 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 RBM10P98175 930 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 PLD1Q13393 1074 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 NFIL3Q16649 462 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 COBLL1Q53SF7 1204 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 ZNF658Q5TYW1 1059 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 OVOS1Q6IE37 1185 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 POTEHQ6S545 545 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TMC5Q6UXY8 1006 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 GLYCTKQ8IVS8 523 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TCEAL8Q8IYN2 117 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 DCP1BQ8IZD4 617 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 ELMOD1Q8N336 334 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 RDH13Q8NBN7 331 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 LEMD2Q8NC56 503 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 C3orf58Q8NDZ4 430 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 GLIS3Q8NEA6 775 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TMC2Q8TDI7 906 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 SMG7Q92540 1137 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 NXPE3Q969Y0 559 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 CHAMP1Q96JM3 812 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 MFSD14AQ96MC6 490 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 TSG101Q99816 390 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 FGFBP2Q9BYJ0 223 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 DNAI2Q9GZS0 605 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 GOLPH3LQ9H4A5 285 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 PDE11AQ9HCR9 933 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 WDR6Q9NNW5 1121 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 DMAC2Q9NW81 257 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 HSFX1Q9UBD0 423 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
PSEN1-222ENST00000557356 FBXL5Q9UKA1 691 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 FBXW11Q9UKB1 542 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 AGAP1Q9UPQ3 857 aa8.47□□□□□ -1.05
PSEN1-222ENST00000557356 GOLGA6L22H0YM25 854 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 I3L4J1 428 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 ZNF197O14709 1029 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 CLIC2O15247 247 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 STX10O60499 249 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 PHACTR2O75167 634 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 LRG1P02750 347 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 NR3C1P04150 777 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 ITGB3P05106 788 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 C8AP07357 584 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 SPATA31D3P0C874 917 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 KRT13P13646 458 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 CPB1P15086 417 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 TRIM21P19474 475 aaKnown RBP8.46□□□□□ -1.06
PSEN1-222ENST00000557356 LHX1P48742 406 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 TUFMP49411 452 aaKnown RBP8.46□□□□□ -1.06
PSEN1-222ENST00000557356 ARPP19P56211 112 aa8.46□□□□□ -1.06
PSEN1-222ENST00000557356 ROR1Q01973 937 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms