RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TUBGCP6Q96RT7 1819 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 SHTN1A0MZ66 631 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 OVOL3O00110 214 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TMEM127O75204 238 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 RBP3P10745 1247 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 POU3F3P20264 500 aaPredicted RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 AGXTP21549 392 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 WASP42768 502 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TMF1P82094 1093 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 KRTAP1-1Q07627 177 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 ABHD18Q0P651 414 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 MGAT2Q10469 447 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TUBA3CQ13748 450 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 RRP12Q5JTH9 1297 aaKnown RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 PPP4R3AQ6IN85 833 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TUBA3EQ6PEY2 450 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 SYNE4Q8N205 404 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 MSL3Q8N5Y2 521 aaKnown RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 OR52N2Q8NGI0 321 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TSPEARQ8WU66 669 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 EXTL1Q92935 676 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 UHRF1Q96T88 793 aaPredicted RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 ZNF341Q9BYN7 854 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 REXO4Q9GZR2 422 aaKnown RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 ZNF277Q9NRM2 450 aaPredicted RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 LANCL2Q9NS86 450 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 TMEM140Q9NV12 185 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 MKS1Q9NXB0 559 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 SCOCQ9UIL1 159 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 ABT1Q9ULW3 272 aaKnown RBP4.96□□□□□ -1.62
CHD8-212ENST00000557329 COL4A3BPQ9Y5P4 624 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 SPATA31E1Q6ZUB1 1445 aa4.96□□□□□ -1.62
CHD8-212ENST00000557329 ANKRD36BQ8N2N9 1353 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 GAGE12BA1L429 117 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 KLRG2A4D1S0 409 aaPredicted RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 KLHL33A6NCF5 533 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 GAGE12HA6NDE8 117 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 GLTPD2A6NH11 291 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 TBKBP1A7MCY6 615 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 FSHBP01225 129 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 C6P13671 934 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 CHRNA5P30532 468 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 RFC4P35249 363 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 MCAMP43121 646 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 AMPHP49418 695 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 RABGGTBP53611 331 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 ACAP1Q15027 740 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 LSM12Q3MHD2 195 aaKnown RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 EFCAB12Q6NXP0 572 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 ABHD15Q6UXT9 468 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 DRC7Q8IY82 874 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 ELOA2Q8IYF1 753 aaPredicted RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 IL17DQ8TAD2 202 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 TGFBRAP1Q8WUH2 860 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 CACTINQ8WUQ7 758 aaKnown RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 SLC13A1Q9BZW2 595 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 PCDH12Q9NPG4 1184 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 TYW1Q9NV66 732 aaKnown RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 TRPS1Q9UHF7 1281 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 NOP58Q9Y2X3 529 aaKnown RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 N4BP2Q86UW6 1770 aaPredicted RBP4.95□□□□□ -1.62
CHD8-212ENST00000557329 TTC21BQ7Z4L5 1316 aa4.95□□□□□ -1.62
CHD8-212ENST00000557329 PALLDQ8WX93 1383 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 AMHP03971 560 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 HLA-DOAP06340 250 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 HSPA8P11142 646 aaKnown RBP4.94□□□□□ -1.62
CHD8-212ENST00000557329 VCAM1P19320 739 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 SOX10P56693 466 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 SRSF2Q01130 221 aaKnown RBP4.94□□□□□ -1.62
CHD8-212ENST00000557329 AMPD3Q01432 767 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 MAP2K1Q02750 393 aaPredicted RBP4.94□□□□□ -1.62
CHD8-212ENST00000557329 ITKQ08881 620 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 PTPROQ16827 1216 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 BMT2Q1RMZ1 405 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 DEFB115Q30KQ5 88 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 INAVAQ3KP66 663 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 PGM2L1Q6PCE3 622 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 MIGA2Q7L4E1 593 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 GPRIN1Q7Z2K8 1008 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 ZNF572Q7Z3I7 529 aaPredicted RBP4.94□□□□□ -1.62
CHD8-212ENST00000557329 MB21D1Q8N884 522 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 RAPGEF4Q8WZA2 1011 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 PRRX2Q99811 253 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 C7orf25Q9BPX7 421 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 NDC1Q9BTX1 674 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 SLC46A2Q9BY10 475 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 WNK3Q9BYP7 1800 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 KIAA1210Q9ULL0 1709 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 TRPM1Q7Z4N2 1603 aa4.94□□□□□ -1.62
CHD8-212ENST00000557329 PIK3C2AO00443 1686 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 ANKRD62A6NC57 917 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 ADH4P08319 380 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 ALAS1P13196 640 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 GSPT1P15170 499 aaKnown RBP4.93□□□□□ -1.62
CHD8-212ENST00000557329 PTPN7P35236 360 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 SCNN1GP51170 649 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 CLRN1P58418 232 aa4.93□□□□□ -1.62
CHD8-212ENST00000557329 TAP1Q03518 808 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms