RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 WNT7BP56706 349 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 LILRA4P59901 499 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 TFAMQ00059 246 aaKnown RBP17.92■□□□□ 0.46
VSX1-207ENST00000557285 ADCY1Q08828 1119 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 STXBP4Q6ZWJ1 553 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 CEP57L1Q8IYX8 460 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 ITFG1Q8TB96 612 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 SPATA32Q96LK8 384 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 PGLYRP2Q96PD5 576 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 ASB7Q9H672 318 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 TMEM206Q9H813 350 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 DPP3Q9NY33 737 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 RBAKQ9NYW8 714 aaPredicted RBP17.92■□□□□ 0.46
VSX1-207ENST00000557285 RCOR1Q9UKL0 485 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 KCNH3Q9ULD8 1083 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 DERAQ9Y315 318 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.92■□□□□ 0.46
VSX1-207ENST00000557285 NARSO43776 548 aaKnown RBP17.91■□□□□ 0.46
VSX1-207ENST00000557285 ABLIM3O94929 683 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 IL18RAPO95256 599 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 ODC1P11926 461 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 HOXA9P31269 272 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 TDGQ13569 410 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 UVSSAQ2YD98 709 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 PABPC1LQ4VXU2 614 aaKnown RBP17.91■□□□□ 0.46
VSX1-207ENST00000557285 FAM26FQ5R3K3 315 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 OVOS1Q6IE37 1185 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 RNF19BQ6ZMZ0 732 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 NELFCDQ8IXH7 590 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 LEO1Q8WVC0 666 aaPredicted RBP17.91■□□□□ 0.46
VSX1-207ENST00000557285 SENP8Q96LD8 212 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 TSPAN18Q96SJ8 248 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 C7orf25Q9BPX7 421 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.91■□□□□ 0.46
VSX1-207ENST00000557285 EPS15L1Q9UBC2 864 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 DNMT3BQ9UBC3 853 aaKnown RBP17.91■□□□□ 0.46
VSX1-207ENST00000557285 SERTAD1Q9UHV2 236 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 C2CD2Q9Y426 696 aa17.91■□□□□ 0.46
VSX1-207ENST00000557285 NOTCH4Q99466 2003 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 A0A1B0GVL5 298 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 PIRO00625 290 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 PAPLNO95428 1278 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 LAMP2P13473 410 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 ATF2P15336 505 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 GARTP22102 1010 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 AARSP49588 968 aaKnown RBP eCLIP17.9■□□□□ 0.46
VSX1-207ENST00000557285 KRT85P78386 507 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 CUL4BQ13620 913 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 FBXL6Q8N531 539 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 FAM122AQ96E09 287 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 CORO1BQ9BR76 489 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 PYM1Q9BRP8 204 aaKnown RBP17.9■□□□□ 0.46
VSX1-207ENST00000557285 MFSD1Q9H3U5 465 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 MAGEF1Q9HAY2 307 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 FBXL21Q9UKT6 434 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 INSL5Q9Y5Q6 135 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 TSC2P49815 1807 aa17.9■□□□□ 0.46
VSX1-207ENST00000557285 ZDBF2Q9HCK1 2354 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 ANO9A1A5B4 782 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 CYB561D2O14569 222 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 EXTL3O43909 919 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 PFKFB1P16118 471 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 VCPP55072 806 aaKnown RBP17.89■□□□□ 0.45
VSX1-207ENST00000557285 TWF1Q12792 350 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 LMBRD2Q68DH5 695 aaPredicted RBP17.89■□□□□ 0.45
VSX1-207ENST00000557285 BMP8AQ7Z5Y6 402 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 BRSK2Q8IWQ3 736 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 FGF13Q92913 245 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 TMEM209Q96SK2 561 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 PDE11AQ9HCR9 933 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 SLC39A2Q9NP94 309 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 IGSF9Q9P2J2 1179 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 AFF4Q9UHB7 1163 aaKnown RBP17.89■□□□□ 0.45
VSX1-207ENST00000557285 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 MRPS23Q9Y3D9 190 aaKnown RBP17.89■□□□□ 0.45
VSX1-207ENST00000557285 NUMBLQ9Y6R0 609 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 ZNF318Q5VUA4 2279 aa17.89■□□□□ 0.45
VSX1-207ENST00000557285 ARHGEF37A1IGU5 675 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 OAZ2O95190 189 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 LDHAP00338 332 aaKnown RBP17.88■□□□□ 0.45
VSX1-207ENST00000557285 ITGB3P05106 788 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 RHOP08100 348 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 CFHP08603 1231 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 KRT19P08727 400 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 POLR2BP30876 1174 aaKnown RBP17.88■□□□□ 0.45
VSX1-207ENST00000557285 HOXD13P35453 343 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 TAF6P49848 677 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 SLC5A9Q2M3M2 681 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 IER5LQ5T953 404 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 TPGS2Q68CL5 300 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 UNC13DQ70J99 1090 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 TCEAL8Q8IYN2 117 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 GPD1LQ8N335 351 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 DUSP12Q9UNI6 340 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 AGAP1Q9UPQ3 857 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 KMT2EQ8IZD2 1858 aa17.88■□□□□ 0.45
VSX1-207ENST00000557285 OR6C75A6NL08 312 aa17.87■□□□□ 0.45
VSX1-207ENST00000557285 CLIC2O15247 247 aa17.87■□□□□ 0.45
VSX1-207ENST00000557285 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.45
VSX1-207ENST00000557285 SLFN14P0C7P3 912 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms