RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 ANXA6P08133 673 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 TTC23Q5W5X9 447 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ZNF579Q8NAF0 562 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 PTPRN2Q92932 1015 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 FNDC3AQ9Y2H6 1198 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 NCKAP5LQ9HCH0 1330 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 BTN3A3O00478 584 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 STARP49675 285 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 SLC16A1P53985 500 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 BICRALQ6AI39 1079 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 OOSP2Q86WS3 158 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ADI1Q9BV57 179 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MAPRE3Q9UPY8 281 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CCNA2P20248 432 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 SCRN3Q0VDG4 424 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 NSL1Q96IY1 281 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 STN1Q9H668 368 aaKnown RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 GSTK1Q9Y2Q3 226 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CCDC195A0A1B0GUA6 201 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ITIH2P19823 946 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CTCFP49711 727 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 ME3Q16798 604 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 C2orf40Q9H1Z8 148 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 MAN1C1Q9NR34 630 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 UBA6A0AVT1 1052 aaPredicted RBP9.22□□□□□ -0.93
SYNE3-205ENST00000557275 FAM92AA1XBS5 289 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 LARGE2Q8N3Y3 721 aa9.22□□□□□ -0.93
SYNE3-205ENST00000557275 KIAA0586Q9BVV6 1533 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 ZMYND10O75800 440 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 RCAN1P53805 252 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 SKAP1Q86WV1 359 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 LMTK3Q96Q04 1460 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 AXIN1O15169 862 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 CD3EAPO15446 510 aaKnown RBP9.21□□□□□ -0.93
SYNE3-205ENST00000557275 PDIA2Q13087 525 aaKnown RBP9.21□□□□□ -0.93
SYNE3-205ENST00000557275 ATP13A5Q4VNC0 1218 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 C7orf31Q8N865 590 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 SLC20A1Q8WUM9 679 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 SARS2Q9NP81 518 aaKnown RBP9.21□□□□□ -0.93
SYNE3-205ENST00000557275 TJP2Q9UDY2 1190 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 HEY1Q9Y5J3 304 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 REREQ9P2R6 1566 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 TOPBP1Q92547 1522 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 TPRP12270 2363 aaKnown RBP9.21□□□□□ -0.93
SYNE3-205ENST00000557275 KYNUQ16719 465 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 ARHGAP22Q7Z5H3 698 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 RFFLQ8WZ73 363 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 CEP170P1Q96L14 293 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 NAT9Q9BTE0 207 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 TPRKBQ9Y3C4 175 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 KDM5BQ9UGL1 1544 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 GADD45BO75293 160 aaPredicted RBP9.21□□□□□ -0.93
SYNE3-205ENST00000557275 AP3B2Q13367 1082 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 KSR1Q8IVT5 923 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 THTPAQ9BU02 230 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 FHOD1Q9Y613 1164 aa9.21□□□□□ -0.93
SYNE3-205ENST00000557275 ATP9AO75110 1047 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 RALAP11233 206 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 GALNT3Q14435 633 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 KCNT1Q5JUK3 1230 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 ZNF564Q8TBZ8 553 aaPredicted RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 EFCAB1Q9HAE3 211 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 MAP3K20Q9NYL2 800 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 LRCH1Q9Y2L9 728 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 LOC102724159A0A0B4J2E5 919 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 BAIAP3O94812 1187 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CNTFP26441 200 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 RAP1GAPP47736 663 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 ALDH18A1P54886 795 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 SLC7A5Q01650 507 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 PWP2Q15269 919 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CCT8L2Q96SF2 557 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 EMILIN3Q9NT22 766 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 GJA3Q9Y6H8 435 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 NPC1L1Q9UHC9 1359 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 METTL21EPA6NDL7 271 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 PALMO75781 387 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 DPP9Q86TI2 863 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 SNUPNO95149 360 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CLTBP09497 229 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CCNJLQ8IV13 435 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CRELD1Q96HD1 420 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 WNK4Q96J92 1243 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 MSTO1Q9BUK6 570 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 TIPINQ9BVW5 301 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 SLC13A1Q9BZW2 595 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 TSC22D2O75157 780 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 AP1G2O75843 785 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 CDK20Q8IZL9 346 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 ZCCHC7Q8N3Z6 543 aaKnown RBP9.21□□□□□ -0.94
SYNE3-205ENST00000557275 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 KLHL28Q9NXS3 571 aa9.21□□□□□ -0.94
SYNE3-205ENST00000557275 MYO5CQ9NQX4 1742 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms