RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 CCDC38Q502W7 563 aa24.02■■□□□ 1.44
RCCD1-208ENST00000557266 APOBEC3FQ8IUX4 373 aaKnown RBP24.02■■□□□ 1.44
RCCD1-208ENST00000557266 KATNAL2Q8IYT4 538 aa24.02■■□□□ 1.44
RCCD1-208ENST00000557266 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.02■■□□□ 1.44
RCCD1-208ENST00000557266 JPH2Q9BR39 696 aaPredicted RBP24.02■■□□□ 1.44
RCCD1-208ENST00000557266 MRPL47Q9HD33 250 aaKnown RBP24.02■■□□□ 1.44
RCCD1-208ENST00000557266 INTS9Q9NV88 658 aaKnown RBP24.02■■□□□ 1.44
RCCD1-208ENST00000557266 THAP12O43422 761 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 PEX10O60683 326 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 GJB6O95452 261 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 ATF2P15336 505 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 UBA1P22314 1058 aaKnown RBP24.01■■□□□ 1.43
RCCD1-208ENST00000557266 C1QBPQ07021 282 aaKnown RBP24.01■■□□□ 1.43
RCCD1-208ENST00000557266 NCOA4Q13772 614 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 CAPSQ13938 189 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 CCDC13Q8IYE1 715 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 GPC2Q8N158 579 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 FAM118BQ9BPY3 351 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 EFCC1Q9HA90 598 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 TTLL13PA6NNM8 815 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 HARSP12081 509 aaKnown RBP24.01■■□□□ 1.43
RCCD1-208ENST00000557266 TARBP2Q15633 366 aaKnown RBP24.01■■□□□ 1.43
RCCD1-208ENST00000557266 KCNV1Q6PIU1 500 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 OSBPL8Q9BZF1 889 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 CCDC134Q9H6E4 229 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 TMEM134Q9H6X4 195 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 DNAJC17Q9NVM6 304 aaKnown RBP24.01■■□□□ 1.43
RCCD1-208ENST00000557266 SCINQ9Y6U3 715 aa24.01■■□□□ 1.43
RCCD1-208ENST00000557266 SSC5DA1L4H1 1573 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 GSTTP1A0A1W2PQM5 241 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 TLR3O15455 904 aaKnown RBP24■■□□□ 1.43
RCCD1-208ENST00000557266 CD58P19256 250 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 VPS41P49754 854 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 ZNF132P52740 706 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 EXOC3L1Q86VI1 746 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 CHST13Q8NET6 341 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 TRPM4Q8TD43 1214 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 PRMT1Q99873 361 aaKnown RBP24■■□□□ 1.43
RCCD1-208ENST00000557266 TRAIPQ9BWF2 469 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 USTQ9Y2C2 406 aa24■■□□□ 1.43
RCCD1-208ENST00000557266 ADCY3O60266 1144 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 TTC4O95801 387 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 POTEJP0CG39 1038 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 ADCY8P40145 1251 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 RFC5P40937 340 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 CCNG2Q16589 344 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 ANKRD35Q8N283 1001 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 UBR7Q8N806 425 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 CCDC113Q9H0I3 377 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 HOMER3Q9NSC5 361 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 ANAPC5Q9UJX4 755 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 H0YHG0 523 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 FARP2O94887 1054 aaPredicted RBP23.99■■□□□ 1.43
RCCD1-208ENST00000557266 GJC1P36383 396 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 ALDH5A1P51649 535 aaPredicted RBP23.99■■□□□ 1.43
RCCD1-208ENST00000557266 CAV1Q03135 178 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 PLCB4Q15147 1175 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 CNGA2Q16280 664 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 TAOK1Q7L7X3 1001 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 EXD1Q8NHP7 514 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 PWWP2AQ96N64 755 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 SCLT1Q96NL6 688 aa23.99■■□□□ 1.43
RCCD1-208ENST00000557266 FAM189A1O60320 539 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 HNRNPH1P31943 449 aaKnown RBP23.98■■□□□ 1.43
RCCD1-208ENST00000557266 TNFSF9P41273 254 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 ANKRD20A8PQ5CZ79 823 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 NOL9Q5SY16 702 aaKnown RBP23.98■■□□□ 1.43
RCCD1-208ENST00000557266 LRRC34Q8IZ02 419 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 FEZF2Q8TBJ5 459 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 IPO4Q8TEX9 1081 aaKnown RBP23.98■■□□□ 1.43
RCCD1-208ENST00000557266 SERPINB12Q96P63 405 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 GOLGA6L7A0A1B0GV03 622 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 DNM1LO00429 736 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 MMP8P22894 467 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 SSR1P43307 286 aaKnown RBP23.98■■□□□ 1.43
RCCD1-208ENST00000557266 KYNUQ16719 465 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 BRSK2Q8IWQ3 736 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 ZNF606Q8WXB4 792 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 PARVAQ9NVD7 372 aa23.98■■□□□ 1.43
RCCD1-208ENST00000557266 CST3P01034 146 aaPredicted RBP23.97■■□□□ 1.43
RCCD1-208ENST00000557266 RPL7AP62424 266 aaKnown RBP23.97■■□□□ 1.43
RCCD1-208ENST00000557266 ACTR5Q9H9F9 607 aaPredicted RBP23.97■■□□□ 1.43
RCCD1-208ENST00000557266 KLHL11Q9NVR0 708 aa23.97■■□□□ 1.43
RCCD1-208ENST00000557266 GGA3Q9NZ52 723 aa23.97■■□□□ 1.43
RCCD1-208ENST00000557266 GPRC5DQ9NZD1 345 aa23.97■■□□□ 1.43
RCCD1-208ENST00000557266 NINJ2Q9NZG7 142 aa23.97■■□□□ 1.43
RCCD1-208ENST00000557266 ASAP2O43150 1006 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 ASS1P00966 412 aaKnown RBP23.96■■□□□ 1.43
RCCD1-208ENST00000557266 TCF4P15884 667 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 NF2P35240 595 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 SH3D19Q5HYK7 790 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 PPP1R2P3Q6NXS1 205 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 PIGWQ7Z7B1 504 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 CCT6BQ92526 530 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 CTNNAL1Q9UBT7 734 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 IFNAR2P48551 515 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 PRKG1Q13976 671 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 ATP13A4Q4VNC1 1196 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 TREML2Q5T2D2 321 aa23.96■■□□□ 1.43
RCCD1-208ENST00000557266 ZPBP2Q6X784 338 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms