RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 KLK14Q9P0G3 267 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 FBXO4Q9UKT5 387 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 CA14Q9ULX7 337 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 NUMBLQ9Y6R0 609 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 FANCMQ8IYD8 2048 aa9.55□□□□□ -0.88
VRK1-206ENST00000557222 TPRP12270 2363 aaKnown RBP9.55□□□□□ -0.88
VRK1-206ENST00000557222 NCOR2Q9Y618 2525 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 F5P12259 2224 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 KANSL1LA0AUZ9 987 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 BTBD18B2RXH4 712 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 PTGESO14684 152 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 TRAPPC3O43617 180 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 USO1O60763 962 aaKnown RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 F11P03951 625 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 C8AP07357 584 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 SP9P0CG40 484 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 CYP11B2P19099 503 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 ATP2B1P20020 1258 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 FGFR3P22607 806 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 RPA1P27694 616 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 NAMPTP43490 491 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 EFNA5P52803 228 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 PRPF4BQ13523 1007 aaKnown RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 TRIM29Q14134 588 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 NAB2Q15742 525 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 ZNF385CQ66K41 422 aaPredicted RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 TMEM214Q6NUQ4 689 aaKnown RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 PRSS55Q6UWB4 352 aaPredicted RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 GRASPQ7Z6J2 395 aaPredicted RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 CATSPER3Q86XQ3 398 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 DIS3L2Q8IYB7 885 aaKnown RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 ERMNQ8TAM6 284 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 FGF13Q92913 245 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 GTF3C6Q969F1 213 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 B3GALT6Q96L58 329 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 UROC1Q96N76 676 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 NELL2Q99435 816 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 CCDC113Q9H0I3 377 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 PDZD7Q9H5P4 517 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 AVENQ9NQS1 362 aaPredicted RBP9.54□□□□□ -0.88
VRK1-206ENST00000557222 GDE1Q9NZC3 331 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 PHLPP2Q6ZVD8 1323 aa9.54□□□□□ -0.88
VRK1-206ENST00000557222 DOCK6Q96HP0 2047 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 DNAH14Q0VDD8 3507 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 RECQL4O94761 1208 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 KIF4AO95239 1232 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 PRKCBP05771 671 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 DCNP07585 359 aaKnown RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 RPL17P18621 184 aaKnown RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 GDF10P55107 478 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 GPC5P78333 572 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 TLR1Q15399 786 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 MLF2Q15773 248 aaPredicted RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 C4orf17Q53FE4 359 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 SLC44A4Q53GD3 710 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 AXDND1Q5T1B0 1012 aaPredicted RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 PARM1Q6UWI2 310 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 ANKS3Q6ZW76 656 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 CDR2LQ86X02 465 aaPredicted RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 NSUN7Q8NE18 718 aaKnown RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 DEPTORQ8TB45 409 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 WHAMMQ8TF30 809 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 RUBCNQ92622 972 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 FGF14Q92915 247 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 GTPBP3Q969Y2 492 aaKnown RBP9.53□□□□□ -0.88
VRK1-206ENST00000557222 PAAF1Q9BRP4 392 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 BCO2Q9BYV7 579 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 SNTG2Q9NY99 539 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 MTRRQ9UBK8 725 aa9.53□□□□□ -0.88
VRK1-206ENST00000557222 EPG5Q9HCE0 2579 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 CASTOR2A6NHX0 329 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 POM121CA8CG34 1229 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 NCAM2O15394 837 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 ECI2O75521 394 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 MICAL2O94851 1124 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 MYBP10242 640 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 SDHBP21912 280 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 OR1D2P34982 312 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 PUM1Q14671 1186 aaKnown RBP eCLIP9.52□□□□□ -0.89
VRK1-206ENST00000557222 SAFBQ15424 915 aaKnown RBP eCLIP9.52□□□□□ -0.89
VRK1-206ENST00000557222 ME3Q16798 604 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 XKR4Q5GH76 650 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 SPECC1Q5M775 1068 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 HAUS3Q68CZ6 603 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 CLDN23Q96B33 292 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 IFT74Q96LB3 600 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 PPP1R10Q96QC0 940 aaKnown RBP9.52□□□□□ -0.89
VRK1-206ENST00000557222 RPP25Q9BUL9 199 aaKnown RBP9.52□□□□□ -0.89
VRK1-206ENST00000557222 TMEM60Q9H2L4 133 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 MAFFQ9ULX9 164 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 PCDHGA2Q9Y5H1 932 aa9.52□□□□□ -0.89
VRK1-206ENST00000557222 R4GN57 208 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms