RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TOPAZ1Q8N9V7 1692 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 TOM1O60784 492 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MT-CO1P00395 513 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 GNAT2P19087 354 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 PRKAR2BP31323 418 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MCM5P33992 734 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 IARSP41252 1262 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 HMGA2P52926 109 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 PTTG1IPP53801 180 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 GNAI1P63096 354 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MRPS9P82933 396 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 KLF1Q13351 362 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 CLUL1Q15846 466 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MUM1Q2TAK8 710 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 NECAB2Q7Z6G3 386 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MTERF4Q7Z6M4 381 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MB21D1Q8N884 522 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 GLB1L3Q8NCI6 653 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 PAWRQ96IZ0 340 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 PHACTR3Q96KR7 559 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 ACE2Q9BYF1 805 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 API5Q9BZZ5 524 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 CCDC8Q9H0W5 538 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 PDCL3Q9H2J4 239 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 IFT122Q9HBG6 1241 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 SLC2A4RGQ9NR83 387 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 DDX56Q9NY93 547 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 DDX49Q9Y6V7 483 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 SLIT1O75093 1534 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 MAP2P11137 1827 aaKnown RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 CDK12Q9NYV4 1490 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-246ENST00000557030 SSH2Q76I76 1423 aa5.57□□□□□ -1.52
ATXN3-246ENST00000557030 TTC21BQ7Z4L5 1316 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 NRKQ7Z2Y5 1582 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 K7ESF4 209 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 OFD1O75665 1012 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 BAG4O95429 457 aaKnown RBP5.56□□□□□ -1.52
ATXN3-246ENST00000557030 GASTP01350 101 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 MTHFD2P13995 350 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 KRT4P19013 534 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 MAKP20794 623 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ADSLP30566 484 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-246ENST00000557030 DPTQ07507 201 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 MTMR1Q13613 665 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 FHL2Q14192 279 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 VPS72Q15906 364 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ABCB5Q2M3G0 1257 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ANKRD45Q5TZF3 282 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 BTNL9Q6UXG8 535 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ZNF627Q7L945 461 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 MRGPREQ86SM8 312 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 FAM83AQ86UY5 434 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 LDLRAD3Q86YD5 345 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 AMOTL1Q8IY63 956 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ULK2Q8IYT8 1036 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 LENG9Q96B70 501 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 PKNOX2Q96KN3 472 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 SLC2A13Q96QE2 648 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 PUS7LQ9H0K6 701 aaKnown RBP5.56□□□□□ -1.52
ATXN3-246ENST00000557030 DMRT3Q9NQL9 472 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 TRHDEQ9UKU6 1024 aa5.56□□□□□ -1.52
ATXN3-246ENST00000557030 ABCC4O15439 1325 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 ITSN1Q15811 1721 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 AKR1B10O60218 316 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 HMOX1P09601 288 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 ZNF853P0CG23 659 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 MYBL2P10244 700 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 HK1P19367 917 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 RRS1Q15050 365 aaKnown RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 MST1LQ2TV78 715 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 PGM2L1Q6PCE3 622 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 DRICH1Q6PGQ1 229 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 RIN2Q8WYP3 895 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 HOXB13Q92826 284 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 PGBD4Q96DM1 585 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 COG3Q96JB2 828 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 SMAD5Q99717 465 aaKnown RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 CPPED1Q9BRF8 314 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-246ENST00000557030 KCNH6Q9H252 994 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 GPRC5DQ9NZD1 345 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 HS3ST4Q9Y661 456 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 OVOS2A0A0J9YW53 1432 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 OVOS2Q6IE36 1432 aa5.55□□□□□ -1.52
ATXN3-246ENST00000557030 PEAK1Q9H792 1746 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ACEP12821 1306 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 RPTORQ8N122 1335 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 AHRRA9YTQ3 701 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 TRIM24O15164 1050 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ZNF500O60304 480 aaPredicted RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ITGA10O75578 1167 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 REC8O95072 547 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 MBD3O95983 291 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 CRHR1P34998 444 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 MCM2P49736 904 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 PURAQ00577 322 aaKnown RBP5.54□□□□□ -1.52
ATXN3-246ENST00000557030 APBA1Q02410 837 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ADRM1Q16186 407 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 ANO4Q32M45 955 aa5.54□□□□□ -1.52
ATXN3-246ENST00000557030 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms