RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF148Q9UQR1 794 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 STARD13Q9Y3M8 1113 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 ACTL7BQ9Y614 415 aa12.07□□□□□ -0.48
SRP54-213ENST00000556994 WDR91A4D1P6 747 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 NPM3O75607 178 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 PECAM1P16284 738 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 PEX19P40855 299 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 SKIV2L2P42285 1042 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 WNT7BP56706 349 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 NOP14P78316 857 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 CCDC15Q0P6D6 951 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 MTM1Q13496 603 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 MOGSQ13724 837 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 SPARCL1Q14515 664 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 NAIF1Q69YI7 327 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 MON1BQ7L1V2 547 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 FAM13CQ8NE31 585 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 CFAP57Q96MR6 1250 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 C12orf65Q9H3J6 166 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 USH1CQ9Y6N9 552 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 HNRNPDLO14979 420 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 TLR3O15455 904 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 SMNDC1O75940 238 aaKnown RBP eCLIP12.06□□□□□ -0.483e-23■■■■□ 22.6
SRP54-213ENST00000556994 CCNE2O96020 404 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 HSD17B4P51659 736 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 ARSEP51690 589 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 YARSP54577 528 aaKnown RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 RAD23BP54727 409 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 GPS1Q13098 491 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 MAMLD1Q13495 774 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 ANO5Q75V66 913 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 ANKMY2Q8IV38 441 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 ZBED8Q8IZ13 594 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 TTC8Q8TAM2 541 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 LRRC8CQ8TDW0 803 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 SLC7A6OSQ96CW6 309 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 TAAR1Q96RJ0 339 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 LBHD1Q9BQE6 289 aaPredicted RBP12.06□□□□□ -0.48
SRP54-213ENST00000556994 TBC1D10AQ9BXI6 508 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 LRMDAQ9H2I8 198 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRP54-213ENST00000556994 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 LOXHD1Q8IVV2 1947 aa12.06□□□□□ -0.48
SRP54-213ENST00000556994 EDF1O60869 148 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 PEX11AO75192 247 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 GNAZP19086 355 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 TNNI1P19237 187 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 GCKP35557 465 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 PSMC4P43686 418 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 RPL7AP62424 266 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 GCNT1Q02742 428 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 NFX1Q12986 1120 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 DGKZQ13574 1117 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 CAPRIN2Q6IMN6 1127 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 TMC2Q8TDI7 906 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 BICD1Q96G01 975 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 NAF1Q96HR8 494 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 FAM81BQ96LP2 452 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 MAK16Q9BXY0 300 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 NUMBLQ9Y6R0 609 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 ZNF536O15090 1300 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 DNALI1O14645 258 aaPredicted RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 MAGEB2O15479 319 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 PSTPIP1O43586 416 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 CYP1A1P04798 512 aaPredicted RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 PSMC5P62195 406 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 SNRPFP62306 86 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 OVGP1Q12889 678 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 TAF1BQ53T94 588 aaPredicted RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 SCARA3Q6AZY7 606 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 TMEM270Q6UE05 265 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 MFSD7Q6UXD7 560 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
SRP54-213ENST00000556994 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 C4orf19Q8IY42 314 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 KATNAL2Q8IYT4 538 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 GPD1LQ8N335 351 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 CLEC4DQ8WXI8 215 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 MASTLQ96GX5 879 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 C10orf88Q9H8K7 445 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 NPHS2Q9NP85 383 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 HERC5Q9UII4 1024 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 DCTN4Q9UJW0 460 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 SCAF8Q9UPN6 1271 aaKnown RBP12.05□□□□□ -0.48
SRP54-213ENST00000556994 UBIAD1Q9Y5Z9 338 aa12.05□□□□□ -0.48
SRP54-213ENST00000556994 TESPA1A2RU30 521 aaPredicted RBP12.04□□□□□ -0.48
SRP54-213ENST00000556994 LIASO43766 372 aa12.04□□□□□ -0.48
SRP54-213ENST00000556994 ENTPD5O75356 428 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms