RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-222ENST00000556778 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
PRKCH-222ENST00000556778 RSPH1Q8WYR4 309 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 BORCS6Q96GS4 357 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 KLHL5Q96PQ7 755 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 MTMR12Q9C0I1 747 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 ASB7Q9H672 318 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 CLEC1BQ9P126 229 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 SIX4Q9UIU6 781 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 CDH22Q9UJ99 828 aa9.54□□□□□ -0.88
PRKCH-222ENST00000556778 HOOK1Q9UJC3 728 aaKnown RBP9.54□□□□□ -0.88
PRKCH-222ENST00000556778 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
PRKCH-222ENST00000556778 REV3LO60673 3130 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 LOXHD1Q8IVV2 1947 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 ANO9A1A5B4 782 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 LRRIQ3A6PVS8 624 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 TEX28O15482 410 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 LRRN2O75325 713 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 IL18RAPO95256 599 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 ITGB3P05106 788 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 EPCAMP16422 314 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CYP3A5P20815 502 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 NR2F2P24468 414 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 LRPAP1P30533 357 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 POLR2BP30876 1174 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 GLUD2P49448 558 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 SNRPFP62306 86 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 DSG1Q02413 1049 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 ADAM9Q13443 819 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 ADAM15Q13444 863 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 KCNC3Q14003 757 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 SMC1AQ14683 1233 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 DUSP6Q16828 381 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CTC1Q2NKJ3 1217 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 USP41Q3LFD5 358 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CENPPQ6IPU0 288 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 KIAA1841Q6NSI8 718 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 PALB2Q86YC2 1186 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CD302Q8IX05 232 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 C12orf76Q8N812 135 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 BEST2Q8NFU1 509 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CCDC34Q96HJ3 373 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 UROC1Q96N76 676 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 DUSP9Q99956 384 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 APOL5Q9BWW9 433 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 NGRNQ9NPE2 291 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 INTS13Q9NVM9 706 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 CLDND1Q9NY35 253 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 BARX2Q9UMQ3 279 aaPredicted RBP9.53□□□□□ -0.88
PRKCH-222ENST00000556778 AGAP1Q9UPQ3 857 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 C2CD2Q9Y426 696 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 NUB1Q9Y5A7 615 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 PCDHB3Q9Y5E6 796 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 TRANK1O15050 2925 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 GBF1Q92538 1859 aa9.53□□□□□ -0.88
PRKCH-222ENST00000556778 TMEM189-UBE2V1I3L0A0 370 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 HCRTO43612 131 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 CALUO43852 315 aaPredicted RBP9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TBX10O75333 385 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KRT19P08727 400 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TRIM49P0CI25 452 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TRIM49CP0CI26 452 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TNNI1P19237 187 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KCNA5P22460 613 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 FGFR3P22607 806 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KLRC2P26717 231 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KCNQ1P51787 676 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 LILRA4P59901 499 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 COL19A1Q14993 1142 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 PSMD6Q15008 389 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 BLOC1S3Q6QNY0 202 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TRAPPC11Q7Z392 1133 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 SLC9A9Q8IVB4 645 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 GOLGA5Q8TBA6 731 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 PARD3BQ8TEW8 1205 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 SLC22A17Q8WUG5 538 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 NELFBQ8WX92 580 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 NUP62CLQ9H1M0 184 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KIAA1586Q9HCI6 787 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.52□□□□□ -0.895e-38■■■■■ 698.7
PRKCH-222ENST00000556778 CGNQ9P2M7 1197 aaKnown RBP9.52□□□□□ -0.89
PRKCH-222ENST00000556778 CTNND2Q9UQB3 1225 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 DERAQ9Y315 318 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 HCFC2Q9Y5Z7 792 aa9.52□□□□□ -0.89
PRKCH-222ENST00000556778 SF3B1O75533 1304 aaKnown RBP eCLIP9.52□□□□□ -0.89
PRKCH-222ENST00000556778 KIAA0391O15091 583 aaKnown RBP9.51□□□□□ -0.89
PRKCH-222ENST00000556778 C4BPAP04003 597 aaKnown RBP9.51□□□□□ -0.89
PRKCH-222ENST00000556778 URODP06132 367 aa9.51□□□□□ -0.89
PRKCH-222ENST00000556778 WEE2P0C1S8 567 aa9.51□□□□□ -0.89
PRKCH-222ENST00000556778 OR4Q2P0C623 313 aa9.51□□□□□ -0.89
PRKCH-222ENST00000556778 OR1D2P34982 312 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms