RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 LZTS1Q9Y250 596 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 MRPL42Q9Y6G3 142 aaKnown RBP12.11□□□□□ -0.47
FOXN3-212ENST00000556541 VWA8A3KMH1 1905 aa12.11□□□□□ -0.47
FOXN3-212ENST00000556541 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 NRP1O14786 923 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 SYN3O14994 580 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 B4GALT3O60512 393 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TACC1O75410 805 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TYMPP19971 482 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 SLC11A1P49279 550 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
FOXN3-212ENST00000556541 BCAR1P56945 870 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 MYL6P60660 151 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 UBE3AQ05086 875 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 ZNF699Q32M78 642 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 LRIT3Q3SXY7 679 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 KCNT2Q6UVM3 1135 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 VSTM4Q8IW00 320 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 OXCT2Q9BYC2 517 aaPredicted RBP12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TRIM5Q9C035 493 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 NIF3L1Q9GZT8 377 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 SIX2Q9NPC8 291 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 MARCH5Q9NX47 278 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 ADAM28Q9UKQ2 775 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 DSEQ9UL01 958 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
FOXN3-212ENST00000556541 SF3B1O75533 1304 aaKnown RBP eCLIP12.1□□□□□ -0.47
FOXN3-212ENST00000556541 TMEM265A0A087WTH1 108 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 LINC01553A4QN01 128 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 CASTOR2A6NHX0 329 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 TEX33O43247 280 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 AP5Z1O43299 807 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 B3GAT3O94766 335 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 ZNF75DP51815 510 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 GUCY2FP51841 1108 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 YWHAEP62258 255 aaKnown RBP12.09□□□□□ -0.47
FOXN3-212ENST00000556541 INCA1Q0VD86 236 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 SYCP1Q15431 976 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 SPECC1LQ69YQ0 1117 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 PDXDC1Q6P996 788 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 UBR7Q8N806 425 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 C3orf58Q8NDZ4 430 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 IGSF21Q96ID5 467 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 NAA15Q9BXJ9 866 aaKnown RBP12.09□□□□□ -0.47
FOXN3-212ENST00000556541 TTYH3Q9C0H2 523 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 GANQ9H2C0 597 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 GOLGA2P5Q9HBQ8 144 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 CEP72Q9P209 647 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 CNTN6Q9UQ52 1028 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
FOXN3-212ENST00000556541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
FOXN3-212ENST00000556541 TRIOBPQ9H2D6 2365 aa12.08□□□□□ -0.47
FOXN3-212ENST00000556541 PLXNA4Q9HCM2 1894 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PES1O00541 588 aaKnown RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PPEF2O14830 753 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 NOL4O94818 638 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 KIF4AO95239 1232 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 C1RP00736 705 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 KRT19P08727 400 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 UCHL3P15374 230 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 SLC9A1P19634 815 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 FGFR3P22607 806 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 BMPR1AP36894 532 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 ASPAP45381 313 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 OR1G1P47890 313 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 ERVK-21P61565 698 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 TNNC1P63316 161 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 CUL2Q13617 745 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 ARID5BQ14865 1188 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 WDR72Q3MJ13 1102 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PAN2Q504Q3 1202 aaKnown RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PHLDB3Q6NSJ2 640 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 TMCO2Q7Z6W1 182 aaPredicted RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 DDX53Q86TM3 631 aaKnown RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 NEK11Q8NG66 645 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 PAAF1Q9BRP4 392 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 NUCKS1Q9H1E3 243 aaKnown RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 APOBEC3GQ9HC16 384 aaKnown RBP12.08□□□□□ -0.48
FOXN3-212ENST00000556541 MSRAQ9UJ68 235 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 NUB1Q9Y5A7 615 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 A0A0C4DFX4 3053 aa12.08□□□□□ -0.48
FOXN3-212ENST00000556541 GABRDO14764 452 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 SPTLC1O15269 473 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 HUS1O60921 280 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 TADA2AO75478 443 aa12.07□□□□□ -0.48
FOXN3-212ENST00000556541 OAZ2O95190 189 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms