RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 C2CD2Q9Y426 696 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 CLUHO75153 1309 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 PTPRJQ12913 1337 aa8.79□□□□□ -1
VTI1B-206ENST00000556461 MYO10Q9HD67 2058 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 NRG2O14511 850 aaPredicted RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 CLIC2O15247 247 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 EIF3DO15371 548 aaKnown RBP eCLIP8.78□□□□□ -1
VTI1B-206ENST00000556461 XPOTO43592 962 aaKnown RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 EXTL3O43909 919 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 OAZ2O95190 189 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 CDR1P51861 262 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 POU5F1Q01860 360 aaKnown RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 STK4Q13043 487 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 BECN1Q14457 450 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 PPM1LQ5SGD2 360 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 LIN9Q5TKA1 542 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 ARMCX5Q6P1M9 558 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 DSTYKQ6XUX3 929 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 HFE2Q6ZVN8 426 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 GET4Q7L5D6 327 aaPredicted RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 CBWD2Q8IUF1 395 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 CEP57L1Q8IYX8 460 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 FSIP1Q8NA03 581 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 KIAA0895Q8NCT3 520 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 CXorf38Q8TB03 319 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 ITFG1Q8TB96 612 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 SENP8Q96LD8 212 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 TSPAN18Q96SJ8 248 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 RTP3Q9BQQ7 232 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 TMEM206Q9H813 350 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 PIDD1Q9HB75 910 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 PDE11AQ9HCR9 933 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 AGPAT3Q9NRZ7 376 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 RBAKQ9NYW8 714 aaPredicted RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 HSPBP1Q9NZL4 362 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 DNMT3BQ9UBC3 853 aaKnown RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 DPP7Q9UHL4 492 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 SIX4Q9UIU6 781 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 ANK1P16157 1881 aa8.78□□□□□ -1
VTI1B-206ENST00000556461 MTCL1Q9Y4B5 1905 aaKnown RBP8.78□□□□□ -1
VTI1B-206ENST00000556461 SCN1AP35498 2009 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 PVALEFA0A1B0GWK0 134 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 TMEM221A6NGB7 291 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 PRR33A8MZF0 331 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 H7C4K7 107 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 M0R296 226 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 IL18RAPO95256 599 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 PDGFBP01127 241 aaPredicted RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 HNRNPA1P09651 372 aaKnown RBP eCLIP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 ATF2P15336 505 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 TYMPP19971 482 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 POLR2BP30876 1174 aaKnown RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 HOXA9P31269 272 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 GBP2P32456 591 aaPredicted RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 SYKP43405 635 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 TFAMQ00059 246 aaKnown RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 YWHAHQ04917 246 aaPredicted RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 BMT2Q1RMZ1 405 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 OVOS1Q6IE37 1185 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF280DQ6N043 979 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 CYP26C1Q6V0L0 522 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 RNF19BQ6ZMZ0 732 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 OTOP3Q7RTS5 596 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 GPD1LQ8N335 351 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 C1orf127Q8N9H9 656 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 APPL2Q8NEU8 664 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 OR5B17Q8NGF7 314 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 OR10T2Q8NGX3 314 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 ZNF461Q8TAF7 563 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 ASIC4Q96FT7 647 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 PGLYRP2Q96PD5 576 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 SCAND2PQ9GZW5 306 aaPredicted RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 GZF1Q9H116 711 aaPredicted RBP8.77□□□□□ -1.01
VTI1B-206ENST00000556461 KCNK12Q9HB15 430 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 CYP4F11Q9HBI6 524 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 POLIQ9UNA4 740 aa8.77□□□□□ -1.01
VTI1B-206ENST00000556461 NOTCH4Q99466 2003 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 DOCK8Q8NF50 2099 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 A0A1W2PQ27 194 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 A0A1W2PQ64 194 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 A0A1W2PQD8 194 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 ARHGEF37A1IGU5 675 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 CYB561D2O14569 222 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 NARSO43776 548 aaKnown RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 LDHAP00338 332 aaKnown RBP8.76□□□□□ -1.01
VTI1B-206ENST00000556461 ITGB3P05106 788 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 POU2F2P09086 479 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 FSHRP23945 695 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 CYP2J2P51589 502 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 ADCY1Q08828 1119 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 SIGLEC14Q08ET2 396 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 SLC5A9Q2M3M2 681 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 UVSSAQ2YD98 709 aa8.76□□□□□ -1.01
VTI1B-206ENST00000556461 WSCD1Q658N2 575 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms