RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CYP2W1Q8TAV3 490 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ACSF2Q96CM8 615 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 EFHD1Q9BUP0 239 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 TAS2R14Q9NYV8 317 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ZFATQ9P243 1243 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 DGAT1O75907 488 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 OSBPP22059 807 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 TMED1Q13445 227 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 NCOA4Q13772 614 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 PRPSAP1Q14558 356 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 NPY5RQ15761 445 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 SMAD1Q15797 465 aaKnown RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ARHGEF19Q8IW93 802 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 LNX1Q8TBB1 728 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 PPP1R16BQ96T49 567 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 TBX20Q9UMR3 447 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 FAM86B1E9PN63 330 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 SNX3O60493 162 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 FAM86B2P0C5J1 330 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 ESRRGP62508 458 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 DDR1Q08345 913 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 THOC5Q13769 683 aaKnown RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 TAF1BQ53T94 588 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 PRCCQ92733 491 aaPredicted RBP15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 MTBPQ96DY7 904 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 GPRC5CQ9NQ84 441 aa15.82■□□□□ 0.12
ARHGEF40-207ENST00000556399 KIAA0391O15091 583 aaKnown RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 CST8O60676 142 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 KRT10P13645 584 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 EXOC8Q8IYI6 725 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 CCDC97Q96F63 343 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 CNGA2Q16280 664 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 DUOXA2Q1HG44 320 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 ZNF568Q3ZCX4 644 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 NAIF1Q69YI7 327 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 SNRNP48Q6IEG0 339 aaKnown RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 ANO5Q75V66 913 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 PPIL6Q8IXY8 311 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 KAT2BQ92831 832 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 SLC5A5Q92911 643 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 HES6Q96HZ4 224 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 POP1Q99575 1024 aaKnown RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 RAB6BQ9NRW1 208 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 UBTFL6P0CB48 400 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 ARP10275 920 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 SMTNL2Q2TAL5 461 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 MTDHQ86UE4 582 aaKnown RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 TEKT4Q8WW24 435 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 APOL6Q9BWW8 343 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 ZC3H7BQ9UGR2 993 aaKnown RBP15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 PCDHA3Q9Y5H8 950 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
ARHGEF40-207ENST00000556399 SDC4P31431 198 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 DUPD1Q68J44 220 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 BZW1Q7L1Q6 419 aaKnown RBP15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 CEP70Q8NHQ1 597 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 DNAJC18Q9H819 358 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 KCNN4O15554 427 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 STX1BP61266 288 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 CUL3Q13618 768 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 AUHQ13825 339 aaKnown RBP15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 EAPPQ56P03 285 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 KCTD10Q9H3F6 313 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 DCLRE1BQ9H816 532 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 ANLNQ9NQW6 1124 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 APRTP07741 180 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 NUDT17P0C025 328 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 WEE2P0C1S8 567 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 SETSIPP0DME0 302 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 SERPINB4P48594 390 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 STX3Q13277 289 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 CCNG2Q16589 344 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 TAS1R2Q8TE23 839 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 AGAP11Q8TF27 550 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 NINJ2Q9NZG7 142 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 POLLQ9UGP5 575 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 LTN1O94822 1766 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 TAL1P17542 331 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 AP3M2P53677 418 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 MED21Q13503 144 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 ECM1Q16610 540 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 TMEM143Q96AN5 459 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 FAM111AQ96PZ2 611 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 PFDN4Q9NQP4 134 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 CTNNAL1Q9UBT7 734 aa15.8■□□□□ 0.12
ARHGEF40-207ENST00000556399 KPNA7A9QM74 516 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 MUTP22033 750 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 DAB2IPQ5VWQ8 1189 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 HEATR6Q6AI08 1181 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 FOXR2Q6PJQ5 311 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 C1orf131Q8NDD1 294 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 TMEM237Q96Q45 408 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 DCLK3Q9C098 648 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 IVNS1ABPQ9Y6Y0 642 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 NOL4O94818 638 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
ARHGEF40-207ENST00000556399 ZBTB10Q96DT7 871 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms