RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 C9orf57Q5W0N0 161 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 PPP2R2DQ66LE6 453 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 SCARA3Q6AZY7 606 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 KCNT2Q6UVM3 1135 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 DSTYKQ6XUX3 929 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 SV2AQ7L0J3 742 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 COLGALT1Q8NBJ5 622 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 CCDC150Q8NCX0 1101 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 UROC1Q96N76 676 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 TSPAN18Q96SJ8 248 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 PI4K2AQ9BTU6 479 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 COLEC11Q9BWP8 271 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 HSD3B7Q9H2F3 369 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 NDST4Q9H3R1 872 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 SLC28A3Q9HAS3 691 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 RC3H2Q9HBD1 1191 aaKnown RBP8.17□□□□□ -1.1
PCNX4-211ENST00000555929 TMEM8AQ9HCN3 771 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 LIMA1Q9UHB6 759 aaKnown RBP8.17□□□□□ -1.1
PCNX4-211ENST00000555929 ITGA11Q9UKX5 1188 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 LTBP2Q14767 1821 aa8.17□□□□□ -1.1
PCNX4-211ENST00000555929 LINC01553A4QN01 128 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 I3L4J1 428 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 ARHGEF15O94989 841 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 VNN1O95497 513 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 C4BPAP04003 597 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 ZNF18P17022 549 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 IGFBP6P24592 240 aaPredicted RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 GTF2H1P32780 548 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 RPL9P32969 192 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 BMPR1AP36894 532 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 BRCC3P46736 316 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TAF6P49848 677 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 MARSP56192 900 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 UBASH3AP57075 661 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 FANCCQ00597 558 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 DSC1Q08554 894 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 NCOA4Q13772 614 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 ZBTB6Q15916 424 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 PTPN21Q16825 1174 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 UPP1Q16831 310 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TSR1Q2NL82 804 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 ZNF699Q32M78 642 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 SPOPLQ6IQ16 392 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 DCLRE1AQ6PJP8 1040 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 SPRED2Q7Z698 418 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 CEP57Q86XR8 500 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 FBXL13Q8NEE6 735 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TAS1R2Q8TE23 839 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 RSPH1Q8WYR4 309 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TIFAQ96CG3 184 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TMEM169Q96HH4 297 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 HPDLQ96IR7 371 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 ZNF560Q96MR9 790 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TGS1Q96RS0 853 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 MMS19Q96T76 1030 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 TMEM175Q9BSA9 504 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 C17orf80Q9BSJ5 609 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 IMPG2Q9BZV3 1241 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 RAB20Q9NX57 234 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 SPG21Q9NZD8 308 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 NXF1Q9UBU9 619 aaKnown RBP8.16□□□□□ -1.1
PCNX4-211ENST00000555929 SIX4Q9UIU6 781 aa8.16□□□□□ -1.1
PCNX4-211ENST00000555929 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 KPNA7A9QM74 516 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 PIRO00625 290 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 TRAPPC3O43617 180 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 LRRN2O75325 713 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 KIF4AO95239 1232 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 ITGB1P05556 798 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 DNAJB2P25686 324 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 LRPAP1P30533 357 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 PNPLA4P41247 253 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 LILRA4P59901 499 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 TNNC1P63316 161 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 CLDN10P78369 228 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 KRT17Q04695 432 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 ENPEPQ07075 957 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 EXOC3L4Q17RC7 722 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 SGSM1Q2NKQ1 1148 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 WDR72Q3MJ13 1102 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 ZACNQ401N2 412 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 SV2CQ496J9 727 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 EPC2Q52LR7 807 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 MIIPQ5JXC2 388 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 SCARA5Q6ZMJ2 495 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 GBP6Q6ZN66 633 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 TMEM173Q86WV6 379 aaPredicted RBP8.15□□□□□ -1.1
PCNX4-211ENST00000555929 KLHL23Q8NBE8 558 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 EHBP1Q8NDI1 1231 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 C3orf58Q8NDZ4 430 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 MICAL1Q8TDZ2 1067 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 ARNTL2Q8WYA1 636 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 SEMA4DQ92854 862 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 IGSF21Q96ID5 467 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 NAP1L5Q96NT1 182 aaPredicted RBP8.15□□□□□ -1.1
PCNX4-211ENST00000555929 TRIM5Q9C035 493 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 INTS2Q9H0H0 1204 aaKnown RBP8.15□□□□□ -1.1
PCNX4-211ENST00000555929 PRO3102Q9H379 93 aa8.15□□□□□ -1.1
PCNX4-211ENST00000555929 ALG13Q9NP73 1137 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms