RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TNNI1P19237 187 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 STX2P32856 288 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 IL9RQ01113 521 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 TAP1Q03518 808 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 NUGGCQ68CJ6 796 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 MIS18BP1Q6P0N0 1132 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
TUBB3-209ENST00000555609 RXFP1Q9HBX9 757 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 AGO2Q9UKV8 859 aaKnown RBP17.16■□□□□ 0.34
TUBB3-209ENST00000555609 PCDHB4Q9Y5E5 795 aa17.16■□□□□ 0.34
TUBB3-209ENST00000555609 ZNFX1Q9P2E3 1918 aaKnown RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 VWA5AO00534 786 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 MAGEB2O15479 319 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 TJP3O95049 919 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 NQO1P15559 274 aaKnown RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 GNA15P30679 374 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 MAGEA4P43358 317 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 BAATQ14032 418 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 TDRD10Q5VZ19 366 aaKnown RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 ABHD15Q6UXT9 468 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 CGRRF1Q99675 332 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 HERPUD2Q9BSE4 406 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 PHACTR1Q9C0D0 580 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 NOD2Q9HC29 1040 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 FGFR1OP2Q9NVK5 253 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 SLC9A2Q9UBY0 812 aa17.15■□□□□ 0.34
TUBB3-209ENST00000555609 R3HDM2Q9Y2K5 976 aaKnown RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 ZBTB12Q9Y330 459 aaPredicted RBP17.15■□□□□ 0.34
TUBB3-209ENST00000555609 WNT10BO00744 389 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 ATP5HO75947 161 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 LSM8O95777 96 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 CALB1P05937 261 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 CLTAP09496 248 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 IRX3P78415 501 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 NFX1Q12986 1120 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 MTFR1Q15390 333 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 EAPPQ56P03 285 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 RGS9BPQ6ZS82 235 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 GIMAP7Q8NHV1 300 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 TGS1Q96RS0 853 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 FRMD8P1Q9BZ68 369 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 TRIM7Q9C029 511 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 RPAP3Q9H6T3 665 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 ABCF3Q9NUQ8 709 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 KLHL14Q9P2G3 628 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 DNALI1O14645 258 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 TLR3O15455 904 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 PRPF4O43172 522 aaKnown RBP eCLIP17.14■□□□□ 0.333e-7■■■□□ 16.7
TUBB3-209ENST00000555609 UBOX5O94941 541 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 ALADP13716 330 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 NAMPTP43490 491 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 TAS2R40P59535 323 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 NCALDP61601 193 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 PRKCEQ02156 737 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 GRM1Q13255 1194 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 MAML1Q92585 1016 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 TMEM134Q9H6X4 195 aa17.14■□□□□ 0.33
TUBB3-209ENST00000555609 DDX56Q9NY93 547 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 SMG5Q9UPR3 1016 aaKnown RBP17.14■□□□□ 0.33
TUBB3-209ENST00000555609 FAM47DPA6NHR8 397 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 LIASO43766 372 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 VNN1O95497 513 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 DSG3P32926 999 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 NF2P35240 595 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 MORF4L2Q15014 288 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 LRRC14Q15048 493 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-209ENST00000555609 CCDC142Q17RM4 750 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-209ENST00000555609 FAM133BQ5BKY9 247 aaKnown RBP17.13■□□□□ 0.33
TUBB3-209ENST00000555609 GSTA5Q7RTV2 222 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 ANKRD42Q8N9B4 389 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 MGARPQ8TDB4 240 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 RBM15Q96T37 977 aaKnown RBP eCLIP17.13■□□□□ 0.334e-8■□□□□ 11
TUBB3-209ENST00000555609 C11orf70Q9BRQ4 267 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 ECT2Q9H8V3 914 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 ARID2Q68CP9 1835 aa17.13■□□□□ 0.33
TUBB3-209ENST00000555609 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 SUPT20HL2P0C7V6 817 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 ZNF132P52740 706 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 ACTR2P61160 394 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 SUPT20HL1Q3ZLR7 823 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 RBBP8NLQ8NC74 664 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-209ENST00000555609 TEPSINQ96N21 525 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 HEMGNQ9BXL5 484 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 PORCNQ9H237 461 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 MYOZ2Q9NPC6 264 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
TUBB3-209ENST00000555609 FETUBQ9UGM5 382 aa17.12■□□□□ 0.33
TUBB3-209ENST00000555609 STARD13Q9Y3M8 1113 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms