RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 XPOTO43592 962 aaKnown RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 SERPING1P05155 500 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 CYP3A5P20815 502 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ACO1P21399 889 aaKnown RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 ATICP31939 592 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 CLCNKBP51801 687 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 PTK2Q05397 1052 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ZNF394Q53GI3 561 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ZNF571Q7Z3V5 609 aaPredicted RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 FAM71AQ8IYT1 594 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 KIAA1524Q8TCG1 905 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 CCDC42Q96M95 316 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 MMS19Q96T76 1030 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 SDCBP2Q9H190 292 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 SMYD3Q9H7B4 428 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 UBN1Q9NPG3 1134 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 SPTLC3Q9NUV7 552 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TMEM161AQ9NX61 479 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 DAAM1Q9Y4D1 1078 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 PCDHB4Q9Y5E5 795 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 SNX9Q9Y5X1 595 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 UPP2O95045 317 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 FERP16591 822 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TBXAS1P24557 533 aaPredicted RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 CDK17Q00537 523 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 MYO1EQ12965 1108 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 IKBKEQ14164 716 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 MFSD5Q6N075 450 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 CNKSR3Q6P9H4 555 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TMEM270Q6UE05 265 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 GLB1LQ6UWU2 654 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ENOSF1Q7L5Y1 443 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ZNF280BQ86YH2 543 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 ACRBPQ8NEB7 543 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TAF4BQ92750 862 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TSPAN18Q96SJ8 248 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.94□□□□□ -0.66
SRP54-208ENST00000555557 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 VRTNQ9H8Y1 702 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 CISHQ9NSE2 258 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 SLC38A7Q9NVC3 462 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 TRMT1Q9NXH9 659 aaKnown RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 LRFN2Q9ULH4 789 aa10.94□□□□□ -0.66
SRP54-208ENST00000555557 EPN1Q9Y6I3 576 aaPredicted RBP10.94□□□□□ -0.66
SRP54-208ENST00000555557 A0A0U1RQJ8 604 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 B4GALT3O60512 393 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 DDHD2O94830 711 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 NDUFA10O95299 355 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 LRPAP1P30533 357 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 TNNC1P63316 161 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 CYP27A1Q02318 531 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
SRP54-208ENST00000555557 ORC1Q13415 861 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 ASTE1Q2TB18 679 aaPredicted RBP10.93□□□□□ -0.66
SRP54-208ENST00000555557 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
SRP54-208ENST00000555557 NOMO2Q5JPE7 1267 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 TMCO2Q7Z6W1 182 aaPredicted RBP10.93□□□□□ -0.66
SRP54-208ENST00000555557 C7orf61Q8IZ16 206 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 CRIPAKQ8N1N5 446 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 TMEM199Q8N511 208 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 LRRC52Q8N7C0 313 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 C3orf58Q8NDZ4 430 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 ATRIPQ8WXE1 791 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 FAM81BQ96LP2 452 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 ELAC1Q9H777 363 aaKnown RBP10.93□□□□□ -0.66
SRP54-208ENST00000555557 ADAMTS1Q9UHI8 967 aa10.93□□□□□ -0.66
SRP54-208ENST00000555557 KPNA7A9QM74 516 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 F8W810 466 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 PODXLO00592 558 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 ZNF263O14978 683 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 AKR1B10O60218 316 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 STAU1O95793 577 aaKnown RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 SYN1P17600 705 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 RFC2P35250 354 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 PRKCIP41743 596 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 TAF6P49848 677 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 KIF11P52732 1056 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 LILRA4P59901 499 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 GRIK3Q13003 919 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 MAPK8IP2Q13387 824 aaPredicted RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 TAF3Q5VWG9 929 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 NOP9Q86U38 636 aaKnown RBP10.92□□□□□ -0.66
SRP54-208ENST00000555557 DNAAF5Q86Y56 855 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 UBR7Q8N806 425 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 HASPINQ8TF76 798 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 BADQ92934 168 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 BCO2Q9BYV7 579 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 TBC1D13Q9NVG8 400 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 PRKAG2Q9UGJ0 569 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 SCN1AP35498 2009 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 RALGAPA2Q2PPJ7 1873 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 TANC1Q9C0D5 1861 aa10.92□□□□□ -0.66
SRP54-208ENST00000555557 A0A087X0T9 212 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms