RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 LOXL4Q96JB6 756 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 NAP1L4Q99733 375 aaKnown RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 C2orf40Q9H1Z8 148 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 CRISPLD1Q9H336 500 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 AFF4Q9UHB7 1163 aaKnown RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 WASF3Q9UPY6 502 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 NUB1Q9Y5A7 615 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 TIMM13Q9Y5L4 95 aaPredicted RBP9.19□□□□□ -0.94
NEK9-206ENST00000555537 GREB1Q4ZG55 1949 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 TRIP11Q15643 1979 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 F5P12259 2224 aa9.19□□□□□ -0.94
NEK9-206ENST00000555537 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 SPEGQ15772 3267 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 SRRM3A6NNA2 597 aaPredicted RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 SYN3O14994 580 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 MEFVO15553 781 aaPredicted RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 SOAT2O75908 522 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 CPB1P15086 417 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 HOXA6P31267 233 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 CACNB1Q02641 598 aaPredicted RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 SCRN1Q12765 414 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 DUSP4Q13115 394 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 DCAF4L1Q3SXM0 396 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 CPLX2Q6PUV4 134 aaKnown RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 PADI6Q6TGC4 694 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 SDK1Q7Z5N4 2213 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 TMC8Q8IU68 726 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 E2F7Q96AV8 911 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 MSANTD3Q96H12 275 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 MKNK1Q9BUB5 465 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 GPR88Q9GZN0 384 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
NEK9-206ENST00000555537 TMEM60Q9H2L4 133 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 ATXN3LQ9H3M9 355 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 ZSWIM6Q9HCJ5 1215 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 INVSQ9Y283 1065 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 YIPF1Q9Y548 306 aa9.18□□□□□ -0.94
NEK9-206ENST00000555537 WDFY3Q8IZQ1 3526 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 K7ERI5 159 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 DPYSL4O14531 572 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 CYP11B2P19099 503 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 U2AF2P26368 475 aaKnown RBP eCLIP9.17□□□□□ -0.94
NEK9-206ENST00000555537 MCM4P33991 863 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 GRM5P41594 1212 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 NAMPTP43490 491 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 FOSBP53539 338 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 YARSP54577 528 aaKnown RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 CREB5Q02930 508 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 RING1Q06587 406 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 SPAG1Q07617 926 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 ZNF252P-AS1Q0IIN9 211 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 PLK5Q496M5 336 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 ARHGAP29Q52LW3 1261 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 SEZ6Q53EL9 994 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 XKR4Q5GH76 650 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 GPR158Q5T848 1215 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 SH3PXD2AQ5TCZ1 1133 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 ZNF280DQ6N043 979 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 LRSAM1Q6UWE0 723 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 GAREM2Q75VX8 874 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 TNFRSF25Q93038 417 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 ZC3H10Q96K80 434 aaKnown RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 SUSD3Q96L08 255 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 MTMR9Q96QG7 549 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 HHIPQ96QV1 700 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 NACC1Q96RE7 527 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 TMEM209Q96SK2 561 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 EDEM2Q9BV94 578 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 CCDC94Q9BW85 323 aaPredicted RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 SCNM1Q9BWG6 230 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 DUSP15Q9H1R2 295 aaPredicted RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 CDT1Q9H211 546 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 FBRSL1Q9HCM7 1045 aaKnown RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 VPS45Q9NRW7 570 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 GKN1Q9NS71 199 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 SLC8A2Q9UPR5 921 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
NEK9-206ENST00000555537 KIF26AQ9ULI4 1882 aaPredicted RBP9.17□□□□□ -0.94
NEK9-206ENST00000555537 ARHGEF35A5YM69 484 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 OTOL1A6NHN0 477 aaPredicted RBP9.16□□□□□ -0.94
NEK9-206ENST00000555537 CCDC169A6NNP5 214 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 BTBD18B2RXH4 712 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 CTDNEP1O95476 244 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 PRAMEF12O95522 483 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 CAVIN2O95810 425 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 EGFP01133 1207 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 HARSP12081 509 aaKnown RBP9.16□□□□□ -0.94
NEK9-206ENST00000555537 XBP1P17861 261 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 GABRR2P28476 465 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 MARCKSP29966 332 aaPredicted RBP9.16□□□□□ -0.94
NEK9-206ENST00000555537 RPL9P32969 192 aaKnown RBP9.16□□□□□ -0.94
NEK9-206ENST00000555537 KRT2P35908 639 aa9.16□□□□□ -0.94
NEK9-206ENST00000555537 EPHB3P54753 998 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms