RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 ANKFY1Q9P2R3 1169 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 POLHQ9Y253 713 aa6.68□□□□□ -1.34
VRK1-205ENST00000555402 LRRC14BA6NHZ5 514 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 H3BUI4 141 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 LDHAP00338 332 aaKnown RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 CNN3Q15417 329 aaKnown RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 GADL1Q6ZQY3 521 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 KIAA0319LQ8IZA0 1049 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 NSUN6Q8TEA1 469 aaKnown RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 VRK1Q99986 396 aaPredicted RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 SLC46A2Q9BY10 475 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 SENP6Q9GZR1 1112 aaPredicted RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 KCNH6Q9H252 994 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 BCO1Q9HAY6 547 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 EIF2B4Q9UI10 523 aaKnown RBP6.67□□□□□ -1.34
VRK1-205ENST00000555402 L1RE1Q9UN81 338 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 PCDHA3Q9Y5H8 950 aa6.67□□□□□ -1.34
VRK1-205ENST00000555402 LOC102724159A0A0B4J2E5 919 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 CFAP69A5D8W1 941 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 TMEM200CA6NKL6 621 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 GOLIM4O00461 696 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 SLC6A9P48067 706 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 AGFG1P52594 562 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 DUSP2Q05923 314 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 NOGQ13253 232 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 PWP2Q15269 919 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 KHDC1Q4VXA5 237 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 SH2D3CQ8N5H7 860 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 HOXB13Q92826 284 aaPredicted RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 MTFMTQ96DP5 389 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 CYFIP2Q96F07 1278 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 SLC39A13Q96H72 371 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 ELAC2Q9BQ52 826 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 PDCD2LQ9BRP1 358 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 APOL5Q9BWW9 433 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 BHMT2Q9H2M3 363 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 LDAHQ9H6V9 325 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 RSAD1Q9HA92 442 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 LMBRD1Q9NUN5 540 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 SYBUQ9NX95 663 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 GPRC5DQ9NZD1 345 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 SIK3Q9Y2K2 1263 aa6.66□□□□□ -1.34
VRK1-205ENST00000555402 MYBBP1AQ9BQG0 1328 aaKnown RBP6.66□□□□□ -1.34
VRK1-205ENST00000555402 ZNF185O15231 689 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 MGEA5O60502 916 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 PEX2P28328 305 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 SMARCA1P28370 1054 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 PTPN7P35236 360 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 SREBF1P36956 1147 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 HK3P52790 923 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 WNT3AP56704 352 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 FAM189BP81408 668 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 SEMA5AQ13591 1074 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 ZNF362Q5T0B9 420 aaPredicted RBP6.65□□□□□ -1.34
VRK1-205ENST00000555402 MAEAQ7L5Y9 396 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 ARHGEF19Q8IW93 802 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 LCORLQ8N3X6 602 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 FBXO18Q8NFZ0 1043 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 OR7D4Q8NG98 312 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 STRBPQ96SI9 672 aaKnown RBP6.65□□□□□ -1.34
VRK1-205ENST00000555402 CPPED1Q9BRF8 314 aaPredicted RBP6.65□□□□□ -1.34
VRK1-205ENST00000555402 LANCL2Q9NS86 450 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 TMEM140Q9NV12 185 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 PHTF1Q9UMS5 762 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 INSL6Q9Y581 213 aa6.65□□□□□ -1.34
VRK1-205ENST00000555402 EPN1Q9Y6I3 576 aaPredicted RBP6.65□□□□□ -1.34
VRK1-205ENST00000555402 A0A088AWK7 358 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 ADCY6O43306 1168 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
VRK1-205ENST00000555402 ITGA10O75578 1167 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 EIF3JO75822 258 aaKnown RBP6.64□□□□□ -1.35
VRK1-205ENST00000555402 ARIH2O95376 493 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 GASTP01350 101 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 AK2P54819 239 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 RAB1AP62820 205 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 GPSM2P81274 684 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 TARDBPQ13148 414 aaKnown RBP eCLIP6.64□□□□□ -1.35
VRK1-205ENST00000555402 FGL2Q14314 439 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 RAB39AQ14964 217 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 LONRF1Q17RB8 773 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 FAM214AQ32MH5 1076 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 PRR16Q569H4 304 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 METTL24Q5JXM2 366 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 HEATR3Q7Z4Q2 680 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 MORC1Q86VD1 984 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 STON2Q8WXE9 905 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 LRTOMTQ8WZ04 291 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 SLC35A4Q96G79 324 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 CDC5LQ99459 802 aaKnown RBP6.64□□□□□ -1.35
VRK1-205ENST00000555402 NAA15Q9BXJ9 866 aaKnown RBP6.64□□□□□ -1.35
VRK1-205ENST00000555402 NUP62CLQ9H1M0 184 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 ABCF2Q9UG63 623 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 STAP2Q9UGK3 403 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 AJAP1Q9UKB5 411 aaPredicted RBP6.64□□□□□ -1.35
VRK1-205ENST00000555402 DAAM1Q9Y4D1 1078 aa6.64□□□□□ -1.35
VRK1-205ENST00000555402 MTSS1O43312 755 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 GPR32O75388 356 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 TYRP1P17643 537 aa6.63□□□□□ -1.35
VRK1-205ENST00000555402 DDCP20711 480 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms