RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BRWD1Q9NSI6 2320 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 TMEM265A0A087WTH1 108 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KCNJ18B7U540 433 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 H3BNC9 293 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 PODXLO00592 558 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 INPPL1O15357 1258 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 TEX33O43247 280 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 MFAP3LO75121 409 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 B3GAT3O94766 335 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KIF4AO95239 1232 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 IL18RAPO95256 599 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 RB1P06400 928 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KRT19P08727 400 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 CCDC175P0C221 793 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 FOSL2P15408 326 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 TNNI1P19237 187 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 PPM1AP35813 382 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 COPB1P53618 953 aaKnown RBP10.63□□□□□ -0.71
PSEN1-213ENST00000555386 ADKP55263 362 aaKnown RBP10.63□□□□□ -0.71
PSEN1-213ENST00000555386 SNRPFP62306 86 aaKnown RBP10.63□□□□□ -0.71
PSEN1-213ENST00000555386 CYP24A1Q07973 514 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KCNJ12Q14500 433 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KRT31Q15323 416 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 NAB2Q15742 525 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 PLPP4Q5VZY2 271 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 CEP57Q86XR8 500 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 EFCAB13Q8IY85 973 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 BEST2Q8NFU1 509 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 SPPL3Q8TCT6 385 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 IGSF21Q96ID5 467 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 FNBP1Q96RU3 617 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 KIAA1586Q9HCI6 787 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 PUF60Q9UHX1 559 aaKnown RBP10.63□□□□□ -0.71
PSEN1-213ENST00000555386 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
PSEN1-213ENST00000555386 A0A1W2PQC6 194 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 BICDL2A1A5D9 508 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 C5orf67F2Z3F1 127 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 PPEF2O14830 753 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 KIAA0391O15091 583 aaKnown RBP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 CETN3O15182 167 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 TMEM191BP0C7N4 346 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 CCNE1P24864 410 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 RPL13P26373 211 aaKnown RBP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 IRS1P35568 1242 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 ERVFC1P60507 584 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 CENPPQ6IPU0 288 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 TAS1R1Q7RTX1 841 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 TMC7Q7Z402 723 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 RBM23Q86U06 439 aaKnown RBP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 TMTC1Q8IUR5 882 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 FAM114A1Q8IWE2 563 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 C12orf56Q8IXR9 622 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 FAM186BQ8IYM0 893 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 VPS52Q8N1B4 723 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 ZNF397Q8NF99 534 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 OR5B17Q8NGF7 314 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 MTMR12Q9C0I1 747 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 ASB7Q9H672 318 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 MARCH5Q9NX47 278 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 DPP3Q9NY33 737 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
PSEN1-213ENST00000555386 TRAF3IP3Q9Y228 551 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 PTPRJQ12913 1337 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 VWA8A3KMH1 1905 aa10.62□□□□□ -0.71
PSEN1-213ENST00000555386 XPOTO43592 962 aaKnown RBP10.61□□□□□ -0.71
PSEN1-213ENST00000555386 LPXNO60711 386 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 AKAP3O75969 853 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 CXCL14O95715 111 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TNNC2P02585 160 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ITGB3P05106 788 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 BRCC3P46736 316 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 DLG4P78352 724 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TUBB2AQ13885 445 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PTPROQ16827 1216 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 UPP1Q16831 310 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ZCWPW2Q504Y3 356 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 KIAA1841Q6NSI8 718 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 EP400NLQ6ZTU2 488 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 CD302Q8IX05 232 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 CSGALNACT2Q8N6G5 542 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 C3orf58Q8NDZ4 430 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 PLEKHO2Q8TD55 490 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 IQCDQ96DY2 449 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 ANKRD36BP1Q96IX9 119 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TCF25Q9BQ70 676 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 TUBB2BQ9BVA1 445 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
PSEN1-213ENST00000555386 GPR62Q9BZJ7 368 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms