RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 BCLAF3A2AJT9 711 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ACKR2O00590 384 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 EDN1P05305 212 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 PDIA3P30101 505 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ELF2Q15723 593 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 STXBP5Q5T5C0 1151 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 KIAA1211LQ6NV74 962 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 HAUS6Q7Z4H7 955 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 TMC8Q8IU68 726 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 CAMKK1Q8N5S9 505 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 PIGOQ8TEQ8 1089 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 AIFM3Q96NN9 605 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 TMEM209Q96SK2 561 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 LRRC3Q9BY71 257 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 C2orf40Q9H1Z8 148 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 MAFFQ9ULX9 164 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 NEUROG3Q9Y4Z2 214 aa10.6□□□□□ -0.71
SCFD1-215ENST00000555259 ASH1LQ9NR48 2969 aaKnown RBP10.6□□□□□ -0.71
SCFD1-215ENST00000555259 IGSF10Q6WRI0 2623 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 A0A087WWV3 80 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 CCDC194A0A1B0GVG4 234 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 PODXLO00592 558 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 DCLK1O15075 740 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 ATG13O75143 517 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 RHOBTB1O94844 696 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 DEXIO95424 95 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 SSRP1Q08945 709 aaKnown RBP10.59□□□□□ -0.71
SCFD1-215ENST00000555259 DCAF4L1Q3SXM0 396 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 RNF19BQ6ZMZ0 732 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 SLFN12Q8IYM2 578 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-215ENST00000555259 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 JAKMIP1Q96N16 626 aaKnown RBP10.59□□□□□ -0.71
SCFD1-215ENST00000555259 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 CCDC113Q9H0I3 377 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 TMEM9BQ9NQ34 198 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 POLR3BQ9NW08 1133 aaPredicted RBP10.59□□□□□ -0.71
SCFD1-215ENST00000555259 YIPF1Q9Y548 306 aa10.59□□□□□ -0.71
SCFD1-215ENST00000555259 TRIP11Q15643 1979 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 DPYSL4O14531 572 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 CDX4O14627 284 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-215ENST00000555259 HYAL3O43820 417 aaPredicted RBP10.58□□□□□ -0.72
SCFD1-215ENST00000555259 CPB1P15086 417 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 LIG1P18858 919 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 EVCP57679 992 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 KARSQ15046 597 aaKnown RBP10.58□□□□□ -0.72
SCFD1-215ENST00000555259 ITPRIPL2Q3MIP1 535 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 TMEM196Q5HYL7 178 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 FSTL4Q6MZW2 842 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 ZNF280DQ6N043 979 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 BLOC1S2Q6QNY1 142 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 DEFB124Q8NES8 71 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 HHIPQ96QV1 700 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 NAP1L4Q99733 375 aaKnown RBP10.58□□□□□ -0.72
SCFD1-215ENST00000555259 DNAJC25Q9H1X3 360 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 OBP2AQ9NY56 170 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 KCNJ14Q9UNX9 436 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 MSRB2Q9Y3D2 182 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 NUB1Q9Y5A7 615 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 CACNA1EQ15878 2313 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 ATG2BQ96BY7 2078 aa10.58□□□□□ -0.72
SCFD1-215ENST00000555259 HELZ2Q9BYK8 2649 aaKnown RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 KHNYNO15037 678 aaKnown RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 RNF40O75150 1001 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 BAG4O95429 457 aaKnown RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 GRSF1Q12849 480 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 SOWAHCQ53LP3 525 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 XKR4Q5GH76 650 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 PIK3AP1Q6ZUJ8 805 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 GAREM2Q75VX8 874 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 BEST2Q8NFU1 509 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 BPIFB1Q8TDL5 484 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 ZMAT2Q96NC0 199 aaKnown RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 SLC38A7Q9NVC3 462 aa10.57□□□□□ -0.72
SCFD1-215ENST00000555259 ASCC3Q8N3C0 2202 aaKnown RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 KIF26AQ9ULI4 1882 aaPredicted RBP10.57□□□□□ -0.72
SCFD1-215ENST00000555259 VNN2O95498 520 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PRAMEF12O95522 483 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 XRCC6P12956 609 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 ATP2B1P20020 1258 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 RPS6KB1P23443 525 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PLD1Q13393 1074 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 PTPAQ15257 358 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 ATF7IP2Q5U623 682 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 ALKAL1Q6UXT8 129 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 CEP120Q8N960 986 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 APPL2Q8NEU8 664 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 DDX12PQ92771 950 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 KCNB2Q92953 911 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 CHFRQ96EP1 664 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 SUSD3Q96L08 255 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 CRISPLD1Q9H336 500 aa10.56□□□□□ -0.72
SCFD1-215ENST00000555259 TOPORSQ9NS56 1045 aaPredicted RBP10.56□□□□□ -0.72
SCFD1-215ENST00000555259 DAXXQ9UER7 740 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms