RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PTCD3Q96EY7 689 aaKnown RBP6.74□□□□□ -1.33
VRK1-203ENST00000555067 MARS2Q96GW9 593 aaKnown RBP6.74□□□□□ -1.33
VRK1-203ENST00000555067 SPATA5L1Q9BVQ7 753 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 KIAA1586Q9HCI6 787 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 KCTD5Q9NXV2 234 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 MYBBP1AQ9BQG0 1328 aaKnown RBP6.74□□□□□ -1.33
VRK1-203ENST00000555067 SALL3Q9BXA9 1300 aa6.74□□□□□ -1.33
VRK1-203ENST00000555067 CDHR4A6H8M9 788 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 TRIM75PA6NK02 468 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 KIF3BO15066 747 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 TSPAN6O43657 245 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 KLF1Q13351 362 aaPredicted RBP6.73□□□□□ -1.33
VRK1-203ENST00000555067 TTF1Q15361 905 aaPredicted RBP6.73□□□□□ -1.33
VRK1-203ENST00000555067 ZGPATQ8N5A5 531 aaKnown RBP6.73□□□□□ -1.33
VRK1-203ENST00000555067 C11orf54Q9H0W9 315 aaPredicted RBP6.73□□□□□ -1.33
VRK1-203ENST00000555067 GSTO2Q9H4Y5 243 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 FOXJ2Q9P0K8 574 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 WASHC2CQ9Y4E1 1318 aa6.73□□□□□ -1.33
VRK1-203ENST00000555067 ALG1L2C9J202 215 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 KIAA0391O15091 583 aaKnown RBP6.72□□□□□ -1.33
VRK1-203ENST00000555067 HAUS5O94927 633 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 WASP42768 502 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 CACNA2D1P54289 1103 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 CTXN1P60606 82 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 NOMO3P69849 1222 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 IRX6P78412 446 aaPredicted RBP6.72□□□□□ -1.33
VRK1-203ENST00000555067 LRRC41Q15345 812 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 NOMO2Q5JPE7 1267 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 CCSAPQ6IQ19 270 aaPredicted RBP6.72□□□□□ -1.33
VRK1-203ENST00000555067 ATL2Q8NHH9 583 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 PDLIM2Q96JY6 352 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 HSFX1Q9UBD0 423 aa6.72□□□□□ -1.33
VRK1-203ENST00000555067 SAP30BPQ9UHR5 308 aaKnown RBP6.72□□□□□ -1.33
VRK1-203ENST00000555067 TCRBV7S2A1N4TA0A589 114 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 EPHB1P54762 984 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 NHLH1Q02575 133 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 SLFN5Q08AF3 891 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 RALBP1Q15311 655 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 GEN1Q17RS7 908 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 SP5Q6BEB4 398 aaPredicted RBP6.71□□□□□ -1.34
VRK1-203ENST00000555067 RHOT1Q8IXI2 618 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 SRRM1Q8IYB3 904 aaKnown RBP6.71□□□□□ -1.34
VRK1-203ENST00000555067 TBC1D15Q8TC07 691 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 SSH3Q8TE77 659 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 SEMA4GQ9NTN9 838 aa6.71□□□□□ -1.34
VRK1-203ENST00000555067 TRGV11A0A075B6L2 103 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 IGLV2-14P01704 120 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 PAX3P23760 479 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 PPP2R5AQ15172 486 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 MIGA2Q7L4E1 593 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 SCARB1Q8WTV0 552 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 NRG4Q8WWG1 115 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 SLC2A13Q96QE2 648 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 UBA5Q9GZZ9 404 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 SLC17A6Q9P2U8 582 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 MCM8Q9UJA3 840 aa6.7□□□□□ -1.34
VRK1-203ENST00000555067 A0A1W2PS29 197 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 MGST3O14880 152 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 PEX1O43933 1283 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 CAND2O75155 1236 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 RBMXL2O75526 392 aaKnown RBP6.69□□□□□ -1.34
VRK1-203ENST00000555067 ZFPL1O95159 310 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 FCER1AP12319 257 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 DPF2Q92785 391 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 SLC39A13Q96H72 371 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 INTUQ9ULD6 942 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 NEU2Q9Y3R4 380 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 PHLDB1Q86UU1 1377 aa6.69□□□□□ -1.34
VRK1-203ENST00000555067 SHTN1A0MZ66 631 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 ORC4O43929 436 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 PROP1O75360 226 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 MTHFD1P11586 935 aaKnown RBP6.68□□□□□ -1.34
VRK1-203ENST00000555067 CDC42EP1Q00587 391 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 MCL1Q07820 350 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 C4orf46Q504U0 113 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 C14orf80Q86SX3 495 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 DCBLD1Q8N8Z6 715 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 Q8NA96 180 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 C9orf106Q8NAJ2 232 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 PUS7LQ9H0K6 701 aaKnown RBP6.68□□□□□ -1.34
VRK1-203ENST00000555067 TDP1Q9NUW8 608 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 COMMD10Q9Y6G5 202 aa6.68□□□□□ -1.34
VRK1-203ENST00000555067 PLIN1O60240 522 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 SCGB1D2O95969 90 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 KRT18P05783 430 aaKnown RBP6.67□□□□□ -1.34
VRK1-203ENST00000555067 FOLR3P41439 243 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 GUCY2FP51841 1108 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 SLC16A1P53985 500 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 CLUL1Q15846 466 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 PABPC1LQ4VXU2 614 aaKnown RBP6.67□□□□□ -1.34
VRK1-203ENST00000555067 SYCP2LQ5T4T6 812 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.67□□□□□ -1.34
VRK1-203ENST00000555067 NECAB2Q7Z6G3 386 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 CLNKQ7Z7G1 428 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 ARHGEF25Q86VW2 580 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 PPM1NQ8N819 430 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
VRK1-203ENST00000555067 MPHOSPH6Q99547 160 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms