RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 GALR2O43603 387 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-214ENST00000554928 RFPL2O75678 378 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 SMC2O95347 1197 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 ADH1AP07327 375 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 OR1D2P34982 312 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 CDR1P51861 262 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 DLG4P78352 724 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 C1orf220Q5T0J3 134 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 RARS2Q5T160 578 aaKnown RBP13.35□□□□□ -0.27
SYNE2-214ENST00000554928 SLC9A9Q8IVB4 645 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 GPR65Q8IYL9 337 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 ADSSL1Q8N142 457 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 SENP8Q96LD8 212 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 TSPAN18Q96SJ8 248 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-214ENST00000554928 MAN1C1Q9NR34 630 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 USP15Q9Y4E8 981 aaPredicted RBP13.35□□□□□ -0.27
SYNE2-214ENST00000554928 CDY1Q9Y6F8 540 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 PLXNA3P51805 1871 aa13.35□□□□□ -0.27
SYNE2-214ENST00000554928 C5orf42Q9H799 3197 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
SYNE2-214ENST00000554928 SYN3O14994 580 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 TRAPPC3O43617 180 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 AKAP3O75969 853 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 GLUD1P00367 558 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
SYNE2-214ENST00000554928 MORC3Q14149 939 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CEP135Q66GS9 1140 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CSGALNACT2Q8N6G5 542 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 GOLGA5Q8TBA6 731 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 GPT2Q8TD30 523 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 ADAMTS19Q8TE59 1207 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 SUSD6Q92537 303 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CCDC34Q96HJ3 373 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 PHF12Q96QT6 1004 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CGRRF1Q99675 332 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 RTP3Q9BQQ7 232 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 KIAA1586Q9HCI6 787 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CD320Q9NPF0 282 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.34□□□□□ -0.27
SYNE2-214ENST00000554928 RMND1Q9NWS8 449 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 CGNQ9P2M7 1197 aaKnown RBP13.34□□□□□ -0.27
SYNE2-214ENST00000554928 FBXL5Q9UKA1 691 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 BACE2Q9Y5Z0 518 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 TCF20Q9UGU0 1960 aaKnown RBP13.34□□□□□ -0.27
SYNE2-214ENST00000554928 SCN1AP35498 2009 aa13.34□□□□□ -0.27
SYNE2-214ENST00000554928 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 HCRTO43612 131 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CALUO43852 315 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-214ENST00000554928 VNN2O95498 520 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CST3P01034 146 aaPredicted RBP13.33□□□□□ -0.28
SYNE2-214ENST00000554928 KRT19P08727 400 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 NR2F2P24468 414 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 TAF6P49848 677 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 ARPP19P56211 112 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 ROR1Q01973 937 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 BFSP1Q12934 665 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 RAB33AQ14088 237 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 AAK1Q2M2I8 961 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CTXN3Q4LDR2 81 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 COBLL1Q53SF7 1204 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CENPPQ6IPU0 288 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 ANKS3Q6ZW76 656 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 TRAPPC11Q7Z392 1133 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 PPFIBP1Q86W92 1011 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 NT5DC4Q86YG4 428 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 WDR49Q8IV35 697 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 PARD3BQ8TEW8 1205 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 TMEM174Q8WUU8 243 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CLSTN2Q9H4D0 955 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 FBXW11Q9UKB1 542 aa13.33□□□□□ -0.28
SYNE2-214ENST00000554928 CYB561D2O14569 222 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 TRIM49P0CI25 452 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 TRIM49CP0CI26 452 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 TNNI1P19237 187 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 SMAD2Q15796 467 aaKnown RBP13.32□□□□□ -0.28
SYNE2-214ENST00000554928 NFIL3Q16649 462 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 DUOXA2Q1HG44 320 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 WSCD1Q658N2 575 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 OSTM1Q86WC4 334 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 OR10T2Q8NGX3 314 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 CACTINQ8WUQ7 758 aaKnown RBP13.32□□□□□ -0.28
SYNE2-214ENST00000554928 ZNF707Q96C28 371 aaPredicted RBP13.32□□□□□ -0.28
SYNE2-214ENST00000554928 ANKRD36BP1Q96IX9 119 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 FNBP1Q96RU3 617 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 HOOK1Q9UJC3 728 aaKnown RBP13.32□□□□□ -0.28
SYNE2-214ENST00000554928 ITGA11Q9UKX5 1188 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 L1RE1Q9UN81 338 aa13.32□□□□□ -0.28
SYNE2-214ENST00000554928 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms