RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TGFB1I1O43294 461 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 FAM86B2P0C5J1 330 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CDK4P11802 303 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 GALK1P51570 392 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 GSTM4Q03013 218 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 PPATQ06203 517 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CDC16Q13042 620 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CALCOCO2Q13137 446 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 TNIP1Q15025 636 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 SH3D19Q5HYK7 790 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 TTC27Q6P3X3 843 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CCDC137Q6PK04 289 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 SLC15A3Q8IY34 581 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 SCYL3Q8IZE3 742 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 GFM2Q969S9 779 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 PTCD3Q96EY7 689 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 MYO3BQ8WXR4 1341 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 OR6B1O95007 311 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 ANPEPP15144 967 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 PAX3P23760 479 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CTNNA2P26232 953 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 HOXD12P35452 270 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 EMP3P54852 163 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 SNAP25P60880 206 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 ADCY1Q08828 1119 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 HNRNPDQ14103 355 aaKnown RBP16.55■□□□□ 0.24
SYNE3-203ENST00000554873 PHLDB2Q86SQ0 1253 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 ZNF398Q8TD17 642 aa16.55■□□□□ 0.24
SYNE3-203ENST00000554873 NCANO14594 1321 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 IGSF9BQ9UPX0 1349 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 F8W8V4 182 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 CDH16O75309 829 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TTC4O95801 387 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 HARSP12081 509 aaKnown RBP16.54■□□□□ 0.24
SYNE3-203ENST00000554873 SOX5P35711 763 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 SPARCL1Q14515 664 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
SYNE3-203ENST00000554873 CERS5Q8N5B7 392 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 GAB3Q8WWW8 586 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 RFFLQ8WZ73 363 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 FAM81BQ96LP2 452 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 CYLDQ9NQC7 956 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TMEM247A6NEH6 219 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 RIMBP2O15034 1052 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TBX3O15119 743 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 ABCB4P21439 1286 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 AP3B2Q13367 1082 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 PDK4Q16654 411 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 KYNUQ16719 465 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 ARHGAP24Q8N264 748 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 ARL10Q8N8L6 244 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 NSL1Q96IY1 281 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 AAASQ9NRG9 546 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TBK1Q9UHD2 729 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TMED5Q9Y3A6 229 aa16.54■□□□□ 0.24
SYNE3-203ENST00000554873 TBCAO75347 108 aaKnown RBP16.53■□□□□ 0.24
SYNE3-203ENST00000554873 PORP16435 677 aaPredicted RBP16.53■□□□□ 0.24
SYNE3-203ENST00000554873 DRAP1Q14919 205 aaPredicted RBP16.53■□□□□ 0.24
SYNE3-203ENST00000554873 ABHD8Q96I13 439 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 STK33Q9BYT3 514 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 UBN1Q9NPG3 1134 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 NDE1Q9NXR1 346 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 A0A1W2PRG0 241 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 BBOX1O75936 387 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 HAUS5O94927 633 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 TMEM253P0C7T8 217 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 LMNB1P20700 586 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 SERPINB8P50452 374 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 SCNN1DP51172 638 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 MTTPP55157 894 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 ALG3Q92685 438 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 KCNN1Q92952 543 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 EBF3Q9H4W6 596 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 ARL8BQ9NVJ2 186 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
SYNE3-203ENST00000554873 EML1O00423 815 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 MSH4O15457 936 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 MAGEB3O15480 346 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 STRNO43815 780 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 TROVE2P10155 538 aaKnown RBP eCLIP16.52■□□□□ 0.24
SYNE3-203ENST00000554873 EEF2P13639 858 aaKnown RBP16.52■□□□□ 0.24
SYNE3-203ENST00000554873 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.24
SYNE3-203ENST00000554873 FYB2Q5VWT5 728 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 CDC42EP5Q6NZY7 148 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 OLFML1Q6UWY5 402 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 ZFPM1Q8IX07 1006 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 ARHGEF26Q96DR7 871 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 SYT11Q9BT88 431 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 FAIMQ9NVQ4 179 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
SYNE3-203ENST00000554873 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms