RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 BRCC3P46736 316 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 UBASH3AP57075 661 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 GTF2BQ00403 316 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 PPP2R3AQ06190 1150 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 LIN9Q5TKA1 542 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 SPATA1Q5VX52 437 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 LRRC8AQ8IWT6 810 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 CCDC150Q8NCX0 1101 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 C3orf58Q8NDZ4 430 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 FEZF2Q8TBJ5 459 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 CACTINQ8WUQ7 758 aaKnown RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 STAMQ92783 540 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 MSTO1Q9BUK6 570 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 GTPBP4Q9BZE4 634 aaKnown RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 HAPLN2Q9GZV7 340 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 MRPL44Q9H9J2 332 aaKnown RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 RPF1Q9H9Y2 349 aaKnown RBP13.47□□□□□ -0.25
SHMT2-214ENST00000554604 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 SEL1LQ9UBV2 794 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 PYCARDQ9ULZ3 195 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
SHMT2-214ENST00000554604 TTC26A0AVF1 554 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 MYMKA6NI61 221 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 XPOTO43592 962 aaKnown RBP13.46□□□□□ -0.25
SHMT2-214ENST00000554604 SERPINC1P01008 464 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 ATP1A3P13637 1013 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 IDEP14735 1019 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.25
SHMT2-214ENST00000554604 GAP43P17677 238 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 IGFBP6P24592 240 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-214ENST00000554604 CASP1P29466 404 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 TNFSF9P41273 254 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 SPAG1Q07617 926 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 HFE2Q6ZVN8 426 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 MAP4K3Q8IVH8 894 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 FAM212AQ96EL1 285 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 MED15Q96RN5 788 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 SORCS3Q9UPU3 1222 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-214ENST00000554604 CDY1Q9Y6F8 540 aa13.46□□□□□ -0.25
SHMT2-214ENST00000554604 CLUHO75153 1309 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 A0A0B4J269 797 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 TMEM221A6NGB7 291 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 LACTBL1A8MY62 500 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 M0R296 226 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 MEFVO15553 781 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 ADAM12O43184 909 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 ZMYND10O75800 440 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 AMPD3Q01432 767 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 SIGLEC14Q08ET2 396 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 RAB33AQ14088 237 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 ENOX2Q16206 610 aaKnown RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 PPM1LQ5SGD2 360 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 SLFN12LQ6IEE8 588 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 CD300LGQ6UXG3 332 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 PBXIP1Q96AQ6 731 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 HVCN1Q96D96 273 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 DNAJC19Q96DA6 116 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 MFSD14AQ96MC6 490 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 FIZ1Q96SL8 496 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 RHOBTB2Q9BYZ6 727 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 PRKD2Q9BZL6 878 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 ST6GALNAC4Q9H4F1 302 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 WDR6Q9NNW5 1121 aaKnown RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 MTRRQ9UBK8 725 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 TUBGCP4Q9UGJ1 667 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 FBXW11Q9UKB1 542 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 UBQLN1Q9UMX0 589 aaKnown RBP13.45□□□□□ -0.26
SHMT2-214ENST00000554604 EXOC7Q9UPT5 735 aa13.45□□□□□ -0.26
SHMT2-214ENST00000554604 SCN1AP35498 2009 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 ANKRD63C9JTQ0 380 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 H7C4K7 107 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 SYN3O14994 580 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 KLRC4O43908 158 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 GCNT3O95395 438 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 ASGR2P07307 311 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 C8AP07357 584 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 HNRNPA1P09651 372 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHMT2-214ENST00000554604 TERF1P54274 439 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 LRMPQ12912 555 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
SHMT2-214ENST00000554604 ZBTB41Q5SVQ8 909 aa13.44□□□□□ -0.26
SHMT2-214ENST00000554604 CDKAL1Q5VV42 579 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms