RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 CHMP6Q96FZ7 201 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 C8orf48Q96LL4 319 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AK8Q96MA6 479 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF570Q96NI8 536 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF317Q96PQ6 595 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PSMD1Q99460 953 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TMEM47Q9BQJ4 181 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TARS2Q9BW92 718 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZC3H12CQ9C0D7 883 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 GANQ9H2C0 597 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 IKZF4Q9H2S9 585 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ADAM7Q9H2U9 754 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CUEDC2Q9H467 287 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC86Q9H6F5 360 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SOX17Q9H6I2 414 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AZI2Q9H6S1 392 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ATP6V0A4Q9HBG4 840 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MKNK2Q9HBH9 465 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ERVK-5Q9HDB9 667 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MLXIPLQ9NP71 852 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 OSGEPQ9NPF4 335 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SH3GLB2Q9NR46 395 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SUSD2Q9UGT4 822 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KCNG1Q9UIX4 513 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF214Q9UL59 606 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 NIP7Q9Y221 180 aaKnown RBP eCLIP2.76□□□□□ -1.976e-7■■■■■ 31.5
PRPF39-207ENST00000554439 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SNCAIPQ9Y6H5 919 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 COL5A2P05997 1499 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ITGB4P16144 1822 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FAM86C2PA6NEL3 165 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PGRMC1O00264 195 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LAD1O00515 517 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DNAJC8O75937 253 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FGGP02679 453 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 VIMP08670 466 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PAEPP09466 180 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TSPY3P0CV98 308 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TSPY8P0CW00 308 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MYBL1P10243 752 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CREB1P16220 341 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CNGA1P29973 690 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 POLR2BP30876 1174 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 EPS15P42566 896 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CASP5P51878 434 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FKBP3Q00688 224 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC63Q05C16 580 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CRYMQ14894 314 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LLGL1Q15334 1064 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PCSK7Q16549 785 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 UBE2SQ16763 222 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 COBLL1Q53SF7 1204 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FAM209AQ5JX71 171 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AGBL2Q5U5Z8 902 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ALKBH5Q6P6C2 394 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 OTUD6AQ7L8S5 288 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PEX26Q7Z412 305 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DAAM2Q86T65 1068 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM59Q8IWR1 403 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC47Q8N1G4 583 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZNF513Q8N8E2 541 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC63Q8NA47 563 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DAGLBQ8NCG7 672 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CCDC197Q8NCU1 140 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MGARPQ8TDB4 240 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ACTRT1Q8TDG2 376 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SH3RF3Q8TEJ3 882 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ATXN2LQ8WWM7 1075 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CELF1Q92879 486 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 LRRC45Q96CN5 670 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TLCD1Q96CP7 247 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DNAJC19Q96DA6 116 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CDK5RAP3Q96JB5 506 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MTMR9Q96QG7 549 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PIGSQ96S52 555 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TSG101Q99816 390 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TACO1Q9BSH4 297 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CARD10Q9BWT7 1032 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CRNKL1Q9BZJ0 848 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FAM129AQ9BZQ8 928 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 TRIM6Q9C030 488 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZMYND12Q9H0C1 365 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 ZHX3Q9H4I2 956 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 KIF9Q9HAQ2 790 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MAGEF1Q9HAY2 307 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 AIPL1Q9NZN9 384 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 CHORDC1Q9UHD1 332 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 DBR1Q9UK59 544 aaKnown RBP2.76□□□□□ -1.97
PRPF39-207ENST00000554439 PPP1R9AQ9ULJ8 1098 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 MINPP1Q9UNW1 487 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SLC12A4Q9UP95 1085 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 SNX24Q9Y343 169 aa2.76□□□□□ -1.97
PRPF39-207ENST00000554439 FRMPD2Q68DX3 1309 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-207ENST00000554439 IGSF9BQ9UPX0 1349 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 KIAA1551Q9HCM1 1747 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 LAMB1P07942 1786 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 PVALEFA0A1B0GWK0 134 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ENO4A6NNW6 628 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 CHURC1-FNTBB4DL54 471 aa2.75□□□□□ -1.97
PRPF39-207ENST00000554439 ERVV-1B6SEH8 477 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms