RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 TCEAL4Q96EI5 215 aa20.38■□□□□ 0.85
CPSF2-203ENST00000554290 NELL2Q99435 816 aa20.38■□□□□ 0.85
CPSF2-203ENST00000554290 PLA2G2FQ9BZM2 168 aa20.38■□□□□ 0.85
CPSF2-203ENST00000554290 CEP72Q9P209 647 aa20.38■□□□□ 0.85
CPSF2-203ENST00000554290 TIMM13Q9Y5L4 95 aaPredicted RBP20.38■□□□□ 0.85
CPSF2-203ENST00000554290 USP34Q70CQ2 3546 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 NCAM2O15394 837 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 GLULP15104 373 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 MAGEA9P43362 315 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 FAM78AQ5JUQ0 283 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 ZBTB41Q5SVQ8 909 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 SLFN12LQ6IEE8 588 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 MAP4K3Q8IVH8 894 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 LTB4R2Q9NPC1 389 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 ASAH2Q9NR71 780 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 CCDC39Q9UFE4 941 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 CPSF3Q9UKF6 684 aaKnown RBP20.37■□□□□ 0.85
CPSF2-203ENST00000554290 MRPS17Q9Y2R5 130 aaKnown RBP20.37■□□□□ 0.85
CPSF2-203ENST00000554290 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
CPSF2-203ENST00000554290 NOTCH4Q99466 2003 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 LRRN2O75325 713 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 LMNAP02545 664 aaKnown RBP20.36■□□□□ 0.85
CPSF2-203ENST00000554290 SP9P0CG40 484 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 MYL4P12829 197 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 TYMPP19971 482 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 NMT1P30419 496 aaKnown RBP20.36■□□□□ 0.85
CPSF2-203ENST00000554290 CCR2P41597 374 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 GUCY2FP51841 1108 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 GPR17Q13304 367 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 PLD1Q13393 1074 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 CUL4AQ13619 759 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 OVOS1Q6IE37 1185 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 JADE1Q6IE81 842 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 SLC39A4Q6P5W5 647 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 TPRG1Q6ZUI0 275 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 HS6ST3Q8IZP7 471 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 TMEM130Q8N3G9 435 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 ASB16Q96NS5 453 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 TRMT61BQ9BVS5 477 aaKnown RBP20.36■□□□□ 0.85
CPSF2-203ENST00000554290 ST6GALNAC4Q9H4F1 302 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 BRD9Q9H8M2 597 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 STK17AQ9UEE5 414 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 DERAQ9Y315 318 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 YIPF1Q9Y548 306 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 R4GN57 208 aa20.36■□□□□ 0.85
CPSF2-203ENST00000554290 ODC1P11926 461 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 CD72P21854 359 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 EPHB3P54753 998 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 EPHA5P54756 1037 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 LILRA4P59901 499 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 MYBPC2Q14324 1141 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 TMEM132DQ14C87 1099 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 ADALQ6DHV7 355 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 POTEHQ6S545 545 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 DNASE1L2Q92874 299 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 SMARCD2Q92925 531 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 EPSTI1Q96J88 318 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 FIZ1Q96SL8 496 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 GPR88Q9GZN0 384 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 ASB7Q9H672 318 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 SPATA6Q9NWH7 488 aaPredicted RBP20.35■□□□□ 0.85
CPSF2-203ENST00000554290 MTF2Q9Y483 593 aaPredicted RBP20.35■□□□□ 0.85
CPSF2-203ENST00000554290 CLIC4Q9Y696 253 aa20.35■□□□□ 0.85
CPSF2-203ENST00000554290 ANKRD63C9JTQ0 380 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 LAMTOR5O43504 91 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 OR4Q2P0C623 313 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 FCARP24071 287 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 TXLNAP40222 546 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 ALDH1A3P47895 512 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 ACOT2P49753 483 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 ZC2HC1CQ53FD0 456 aaPredicted RBP20.34■□□□□ 0.85
CPSF2-203ENST00000554290 IRF7Q92985 503 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 HVCN1Q96D96 273 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 SENP8Q96LD8 212 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 PGLYRP2Q96PD5 576 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 HEBP1Q9NRV9 189 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 FBXO4Q9UKT5 387 aa20.34■□□□□ 0.85
CPSF2-203ENST00000554290 PDCD11Q14690 1871 aaKnown RBP20.34■□□□□ 0.85
CPSF2-203ENST00000554290 POU5F1Q01860 360 aaKnown RBP20.33■□□□□ 0.85
CPSF2-203ENST00000554290 DUSP4Q13115 394 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 GRM2Q14416 872 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 C9orf57Q5W0N0 161 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 CENPPQ6IPU0 288 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 USP49Q70CQ1 688 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 DYMQ7RTS9 669 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 DEPDC1BQ8WUY9 529 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 BORCS6Q96GS4 357 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 ZSWIM3Q96MP5 696 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 SLITRK6Q9H5Y7 841 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 TRPV4Q9HBA0 871 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 SEL1LQ9UBV2 794 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 AGO2Q9UKV8 859 aaKnown RBP20.33■□□□□ 0.85
CPSF2-203ENST00000554290 C2CD2Q9Y426 696 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 SRPRBQ9Y5M8 271 aaKnown RBP20.33■□□□□ 0.85
CPSF2-203ENST00000554290 STYXL1Q9Y6J8 313 aa20.33■□□□□ 0.85
CPSF2-203ENST00000554290 PTPRZ1P23471 2315 aaPredicted RBP20.33■□□□□ 0.84
CPSF2-203ENST00000554290 MAN2B1O00754 1011 aa20.32■□□□□ 0.84
CPSF2-203ENST00000554290 PPEF2O14830 753 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms