RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ERGIC2Q96RQ1 377 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 MSTO1Q9BUK6 570 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ADAM7Q9H2U9 754 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 ADAMTS10Q9H324 1103 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 FBXL21Q9UKT6 434 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 TNFSF13BQ9Y275 285 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 PCDHB12Q9Y5F1 795 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 KAT6AQ92794 2004 aa15.65■□□□□ 0.1
SHMT2-208ENST00000553868 STK25O00506 426 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 NRDCO43847 1150 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 GPR32O75388 356 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 SP9P0CG40 484 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 DARSP14868 501 aaKnown RBP15.64■□□□□ 0.09
SHMT2-208ENST00000553868 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHMT2-208ENST00000553868 AXLP30530 894 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 VAMP7P51809 220 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 MCL1Q07820 350 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 KCNH2Q12809 1159 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 NOLC1Q14978 699 aaKnown RBP eCLIP15.64■□□□□ 0.09
SHMT2-208ENST00000553868 ACAP1Q15027 740 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 CES5AQ6NT32 575 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 THNSL1Q8IYQ7 743 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 RDH13Q8NBN7 331 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 CCDC150Q8NCX0 1101 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 TMC2Q8TDI7 906 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 SAAL1Q96ER3 474 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 ZNF668Q96K58 619 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-208ENST00000553868 PCMTD1Q96MG8 357 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-208ENST00000553868 PPP1R16BQ96T49 567 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 TCF25Q9BQ70 676 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 GINS2Q9Y248 185 aa15.64■□□□□ 0.09
SHMT2-208ENST00000553868 OGTO15294 1046 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 MCF2P10911 925 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 EIF4BP23588 611 aaKnown RBP15.63■□□□□ 0.09
SHMT2-208ENST00000553868 MRPS6P82932 125 aaKnown RBP15.63■□□□□ 0.09
SHMT2-208ENST00000553868 CETN1Q12798 172 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 ZNF568Q3ZCX4 644 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 CATSPER4Q7RTX7 472 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 SLC35C1Q96A29 364 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 NECTIN4Q96NY8 510 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 ADPGKQ9BRR6 497 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 FAM213AQ9BRX8 229 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 CELF4Q9BZC1 486 aaKnown RBP15.63■□□□□ 0.09
SHMT2-208ENST00000553868 MINDY3Q9H8M7 445 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 ENTPD7Q9NQZ7 604 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 AAASQ9NRG9 546 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 TRPV2Q9Y5S1 764 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 HCFC2Q9Y5Z7 792 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 CDY2AQ9Y6F7 541 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 CACNA1IQ9P0X4 2223 aa15.63■□□□□ 0.09
SHMT2-208ENST00000553868 FNDC1Q4ZHG4 1894 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-208ENST00000553868 GTPBP10A4D1E9 387 aaKnown RBP15.62■□□□□ 0.09
SHMT2-208ENST00000553868 GOLGA8IPA6NC78 632 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 GOLGA8JA6NMD2 632 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 P4HA2O15460 535 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 NARSO43776 548 aaKnown RBP15.62■□□□□ 0.09
SHMT2-208ENST00000553868 PROZP22891 400 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 GTF2H1P32780 548 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 POU5F1Q01860 360 aaKnown RBP15.62■□□□□ 0.09
SHMT2-208ENST00000553868 CYP24A1Q07973 514 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 TMEM62Q0P6H9 643 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 SYCP1Q15431 976 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 SURF1Q15526 300 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 AMHR2Q16671 573 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 RARS2Q5T160 578 aaKnown RBP15.62■□□□□ 0.09
SHMT2-208ENST00000553868 CCDC186Q7Z3E2 898 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 CBWD2Q8IUF1 395 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 OSMRQ99650 979 aa15.62■□□□□ 0.09
SHMT2-208ENST00000553868 KRBA1A5PL33 1030 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 TSPAN1O60635 241 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 DCNP07585 359 aaKnown RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 STAG3L1P0CL83 205 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 HARSP12081 509 aaKnown RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 MCCD1P59942 119 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 TBX2Q13207 712 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 PSMD6Q15008 389 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 DCAF4L1Q3SXM0 396 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 FIGNQ5HY92 759 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 ZC3H14Q6PJT7 736 aaKnown RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 GBP6Q6ZN66 633 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 CNGA4Q8IV77 575 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 COLGALT1Q8NBJ5 622 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 CASP10Q92851 521 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 CCDC51Q96ER9 411 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 ZBTB45Q96K62 511 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 FNBP1Q96RU3 617 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 PTPRHQ9HD43 1115 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 RBAKQ9NYW8 714 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 CDV3Q9UKY7 258 aaKnown RBP15.61■□□□□ 0.09
SHMT2-208ENST00000553868 ZFYVE26Q68DK2 2539 aa15.61■□□□□ 0.09
SHMT2-208ENST00000553868 EVPLQ92817 2033 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 A0A1B0GUA9 196 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 TBKBP1A7MCY6 615 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 AKR1B15C9JRZ8 316 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-208ENST00000553868 PMM2O15305 246 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 B4GALT5O43286 388 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 EOMESO95936 686 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 EDN1P05305 212 aa15.6■□□□□ 0.09
SHMT2-208ENST00000553868 ADRB2P07550 413 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms