RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 RPS12P25398 132 aaKnown RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 DSG3P32926 999 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 PLTPP55058 493 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 GPC5P78333 572 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 SP2Q02086 613 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 TCEAL1Q15170 157 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 TNFAIP8L3Q5GJ75 292 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 KRT39Q6A163 491 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 ANO7Q6IWH7 933 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 MTHFD1LQ6UB35 978 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 ARHGAP22Q7Z5H3 698 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 KCNV2Q8TDN2 545 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 GLG1Q92896 1179 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 IWS1Q96ST2 819 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 CCDC113Q9H0I3 377 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 CARD9Q9H257 536 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 COQ4Q9Y3A0 265 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 RASGRF2O14827 1237 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 ZSCAN9O15535 394 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 GRIN3BO60391 1043 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 COMTP21964 271 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 CALB2P22676 271 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 PEX5P50542 639 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 CYP24A1Q07973 514 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 SGSM1Q2NKQ1 1148 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 SV2AQ7L0J3 742 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 APBB1IPQ7Z5R6 666 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 FITM2Q8N6M3 262 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 TEKT4Q8WW24 435 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 DDX1Q92499 740 aaKnown RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 TMEM8AQ9HCN3 771 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 FGFR1OP2Q9NVK5 253 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 CYP39A1Q9NYL5 469 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
SHMT2-207ENST00000553837 PARP2Q9UGN5 583 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 BLOC1S6Q9UL45 172 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 LCTP09848 1927 aa13.01□□□□□ -0.33
SHMT2-207ENST00000553837 TCRBV7S2A1N4TA0A589 114 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ATP5HO75947 161 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 CYP11B1P15538 503 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ATP6V1C1P21283 382 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 GPC3P51654 580 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 MESDQ14696 234 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 PARP6Q2NL67 630 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ANGEL2Q5VTE6 544 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 NUGGCQ68CJ6 796 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 RDM1Q8NG50 284 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ROPN1BQ9BZX4 212 aaPredicted RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 ROPN1Q9HAT0 212 aaPredicted RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 CTNNAL1Q9UBT7 734 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 MTRF1LQ9UGC7 380 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 PRKAG3Q9UGI9 489 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 PNMA3Q9UL41 463 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 EXOC7Q9UPT5 735 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ZNF541Q9H0D2 1346 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 KIAA0391O15091 583 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 DLATP10515 647 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 ALDH3A1P30838 453 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ACTR2P61160 394 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 PRKCEQ02156 737 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 CCDC15Q0P6D6 951 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 LMBRD2Q68DH5 695 aaPredicted RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 MFSD5Q6N075 450 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 XRRA1Q6P2D8 792 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ABHD15Q6UXT9 468 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 NSUN6Q8TEA1 469 aaKnown RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 KIFAP3Q92845 792 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 CD101Q93033 1021 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ZSWIM1Q9BR11 485 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 TXLNGQ9NUQ3 528 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 RAB20Q9NX57 234 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 KLHL14Q9P2G3 628 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
SHMT2-207ENST00000553837 SNX24Q9Y343 169 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 ASB3Q9Y575 518 aa13□□□□□ -0.33
SHMT2-207ENST00000553837 MTA2O94776 668 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 UNC5CO95185 931 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 FDX1P10109 184 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 GZMAP12544 262 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 MFAP3P55082 362 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 RNF43Q68DV7 783 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 TTC27Q6P3X3 843 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 ZDHHC24Q6UX98 284 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 JAMLQ86YT9 394 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 PRELID2Q8N945 189 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 SLC17A8Q8NDX2 589 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 FBXL13Q8NEE6 735 aa12.99□□□□□ -0.33
SHMT2-207ENST00000553837 FBXO25Q8TCJ0 367 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms