RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 ZSCAN12O43309 604 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 AKR1B10O60218 316 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 EN2P19622 333 aaPredicted RBP14.74□□□□□ -0.05
APEX1-205ENST00000553555 LRPAP1P30533 357 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 ASPAP45381 313 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 MYO1EQ12965 1108 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 NAB2Q15742 525 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 LRRC52Q8N7C0 313 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 ACRBPQ8NEB7 543 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 BCO2Q9BYV7 579 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 SPTLC3Q9NUV7 552 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 SLC38A7Q9NVC3 462 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
APEX1-205ENST00000553555 NXF1Q9UBU9 619 aaKnown RBP14.74□□□□□ -0.05
APEX1-205ENST00000553555 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
APEX1-205ENST00000553555 ZNF263O14978 683 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 INPPL1O15357 1258 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 CCP110O43303 1012 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 OFD1O75665 1012 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 CCDC175P0C221 793 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 KRT5P13647 590 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 IBSPP21815 317 aaPredicted RBP14.73□□□□□ -0.05
APEX1-205ENST00000553555 ANXA13P27216 316 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 SCNN1GP51170 649 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 UBE2Q1Q7Z7E8 422 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 REXO1L1PQ8IX06 675 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 SYT11Q9BT88 431 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.73□□□□□ -0.05
APEX1-205ENST00000553555 GOLGA2P5Q9HBQ8 144 aa14.73□□□□□ -0.05
APEX1-205ENST00000553555 REXO2Q9Y3B8 237 aaKnown RBP14.73□□□□□ -0.05
APEX1-205ENST00000553555 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.73□□□□□ -0.05
APEX1-205ENST00000553555 KIAA0355O15063 1070 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 WEE2P0C1S8 567 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 P4HA1P13674 534 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 RFC2P35250 354 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 KRT83P78385 493 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 BMS1Q14692 1282 aaKnown RBP14.72□□□□□ -0.05
APEX1-205ENST00000553555 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 SCARA5Q6ZMJ2 495 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 DEFB128Q7Z7B8 93 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 OLIG1Q8TAK6 271 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 AGPAT1Q99943 283 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 ELAC1Q9H777 363 aaKnown RBP14.72□□□□□ -0.05
APEX1-205ENST00000553555 CYP3A43Q9HB55 503 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 CISHQ9NSE2 258 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 TMEM161AQ9NX61 479 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 ADAMTS1Q9UHI8 967 aa14.72□□□□□ -0.05
APEX1-205ENST00000553555 A0A087X0T9 212 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 TRIM43BA6NCK2 446 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 IPO7O95373 1038 aaKnown RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 TIMP1P01033 207 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 FAM228BP0C875 321 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 TNFAIP3P21580 790 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 PNPLA4P41247 253 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 BPIFB4P59827 614 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 YWHAEP62258 255 aaKnown RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 TNNC1P63316 161 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 CYP27A1Q02318 531 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 GFPT1Q06210 699 aaPredicted RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 SPA17Q15506 151 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 TMEM270Q6UE05 265 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 NOP9Q86U38 636 aaKnown RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 SLC47A2Q86VL8 602 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 VPS36Q86VN1 386 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 TRIM43Q96BQ3 446 aaPredicted RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 VWCEQ96DN2 955 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 PPP1R13BQ96KQ4 1090 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 ZNF560Q96MR9 790 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 SDCBP2Q9H190 292 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 ACP6Q9NPH0 428 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 NOCTQ9UK39 431 aaKnown RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 FNDC1Q4ZHG4 1894 aaPredicted RBP14.71□□□□□ -0.05
APEX1-205ENST00000553555 MYH10P35580 1976 aa14.71□□□□□ -0.05
APEX1-205ENST00000553555 DDX3XO00571 662 aaKnown RBP eCLIP14.7□□□□□ -0.063e-15■■□□□ 13.4
APEX1-205ENST00000553555 POMCP01189 267 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CYP11B1P15538 503 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CD58P19256 250 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 RAP1GAPP47736 663 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 TAF6P49848 677 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 ZNF132P52740 706 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CDH8P55286 799 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 GRIK3Q13003 919 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CLLU1OSQ5K130 101 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 RBBP8NLQ8NC74 664 aaPredicted RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 LNX1Q8TBB1 728 aaPredicted RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 FAM124BQ9H5Z6 455 aaPredicted RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 SMYD3Q9H7B4 428 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 NENFQ9UMX5 172 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 INPP5FQ9Y2H2 1132 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 PCDHA13Q9Y5I0 950 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 LTBP2Q14767 1821 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.7□□□□□ -0.06
APEX1-205ENST00000553555 SPTLC1O15269 473 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 CHRNB2P17787 502 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 ITGB8P26012 769 aa14.7□□□□□ -0.06
APEX1-205ENST00000553555 RPL9P32969 192 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms