RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 GDF3Q9NR23 364 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 ST7Q9NRC1 585 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 CPSF3Q9UKF6 684 aaKnown RBP16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PHF24Q9UPV7 400 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 PCDHB4Q9Y5E5 795 aa16.38■□□□□ 0.21
ABCD4-218ENST00000553486 COL1A2P08123 1366 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 FAM170AA1A519 330 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 INO80B-WBP1J3KQ70 363 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 CLSTN1O94985 981 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 C22orf31O95567 290 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 INSRRP14616 1297 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 PROZP22891 400 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 TNFSF9P41273 254 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 CLCN3P51790 818 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 FAM193AP78312 1265 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 NOP14P78316 857 aaKnown RBP16.37■□□□□ 0.21
ABCD4-218ENST00000553486 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 HSP90B2PQ58FF3 399 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 EMBQ6PCB8 327 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 TRIM72Q6ZMU5 477 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 KLHL7Q8IXQ5 586 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 GSPT2Q8IYD1 628 aaKnown RBP16.37■□□□□ 0.21
ABCD4-218ENST00000553486 TRIM11Q96F44 468 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 INO80BQ9C086 356 aaPredicted RBP16.37■□□□□ 0.21
ABCD4-218ENST00000553486 APOBEC3GQ9HC16 384 aaKnown RBP16.37■□□□□ 0.21
ABCD4-218ENST00000553486 VCANP13611 3396 aa16.37■□□□□ 0.21
ABCD4-218ENST00000553486 KAT6AQ92794 2004 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 ABLIM1O14639 778 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PPFIA4O75335 1185 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 GLI1P08151 1106 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 MYBL1P10243 752 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 UNGP13051 313 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-218ENST00000553486 ACO1P21399 889 aaKnown RBP16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PHKA2P46019 1235 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 GUCY2DQ02846 1103 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 MESDQ14696 234 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PPP2R5EQ16537 467 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 SMYD5Q6GMV2 418 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PPP1R2P3Q6NXS1 205 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 AFG1LQ8WV93 481 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 LENG1Q96BZ8 264 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-218ENST00000553486 FAM212AQ96EL1 285 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 WNT8AQ9H1J5 351 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 EPB41L5Q9HCM4 733 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PTPRHQ9HD43 1115 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PRMT7Q9NVM4 692 aaPredicted RBP16.36■□□□□ 0.21
ABCD4-218ENST00000553486 HPCAL4Q9UM19 191 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 CNTN6Q9UQ52 1028 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 TNFSF13BQ9Y275 285 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 PRUNE2Q8WUY3 3088 aa16.36■□□□□ 0.21
ABCD4-218ENST00000553486 TMEM110-MUSTN1A8MSY1 372 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 RAD51CO43502 376 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 SNAI1O95863 264 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 TMOD1P28289 359 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 IGBP1P78318 339 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 MBTD1Q05BQ5 628 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 PAK2Q13177 524 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 NNTQ13423 1086 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 ZNF568Q3ZCX4 644 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 CCDC26Q8TAB7 109 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 AP1M1Q9BXS5 423 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 KATNBL1Q9H079 304 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 SLITRK6Q9H5Y7 841 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 MED4Q9NPJ6 270 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 CNOT8Q9UFF9 292 aaKnown RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 NUB1Q9Y5A7 615 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 POLR3GO15318 223 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 ATMINO43313 823 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 ADAMTS4O75173 837 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 FGGP02679 453 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 TLE2Q04725 743 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 TRPC3Q13507 836 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 FAM187BQ17R55 369 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 TMEM270Q6UE05 265 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 MCOLN2Q8IZK6 566 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 CAVIN3Q969G5 261 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 RNPC3Q96LT9 517 aaKnown RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 ZSWIM1Q9BR11 485 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
ABCD4-218ENST00000553486 ANK1P16157 1881 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 LTBP2Q14767 1821 aa16.35■□□□□ 0.21
ABCD4-218ENST00000553486 A0A1W2PQ45 241 aaPredicted RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 A0A1W2PQY0 241 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 TRIM43BA6NCK2 446 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 SART1O43290 800 aaKnown RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 ASS1P00966 412 aaKnown RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 COMTP21964 271 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 GNA15P30679 374 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 AARSP49588 968 aaKnown RBP eCLIP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 TERF2Q15554 542 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 DCAF12L1Q5VU92 463 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 MAATS1Q7Z4T9 603 aa16.34■□□□□ 0.21
ABCD4-218ENST00000553486 IFNLR1Q8IU57 520 aaPredicted RBP16.34■□□□□ 0.21
ABCD4-218ENST00000553486 THNSL1Q8IYQ7 743 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms