RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 DACH1Q9UI36 760 aa13□□□□□ -0.33
SNRPF-205ENST00000553192 RBM8AQ9Y5S9 174 aaKnown RBP13□□□□□ -0.33
SNRPF-205ENST00000553192 A0A087WV48 116 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 ATXN7O15265 892 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-205ENST00000553192 CD59P13987 128 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 MXD4Q14582 209 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-205ENST00000553192 GLRA4Q5JXX5 417 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 TPGS2Q68CL5 300 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 PNPLA1Q8N8W4 532 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 RPLP0P6Q8NHW5 317 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 BPIFB1Q8TDL5 484 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 PPP1R10Q96QC0 940 aaKnown RBP12.99□□□□□ -0.33
SNRPF-205ENST00000553192 MTRQ99707 1265 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
SNRPF-205ENST00000553192 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 POLR3CQ9BUI4 534 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-205ENST00000553192 NFKBIZQ9BYH8 718 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 DKK4Q9UBT3 224 aa12.99□□□□□ -0.33
SNRPF-205ENST00000553192 DPYSL4O14531 572 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 VNN2O95498 520 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 GSPT1P15170 499 aaKnown RBP12.98□□□□□ -0.33
SNRPF-205ENST00000553192 GLRA2P23416 452 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 CHMLP26374 656 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 ARL2P36404 184 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 PTGER3P43115 390 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 GALK1P51570 392 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 PLCB2Q00722 1185 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 USP39Q53GS9 565 aaKnown RBP12.98□□□□□ -0.33
SNRPF-205ENST00000553192 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 GAREM2Q75VX8 874 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 CAMK1GQ96NX5 476 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
SNRPF-205ENST00000553192 GKN1Q9NS71 199 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 AFF4Q9UHB7 1163 aaKnown RBP12.98□□□□□ -0.33
SNRPF-205ENST00000553192 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 YIPF1Q9Y548 306 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 SPTA1P02549 2419 aa12.98□□□□□ -0.33
SNRPF-205ENST00000553192 CYP3A7-CYP3A51PA0A087WV96 503 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 SGSM2O43147 1006 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 TRAPPC3O43617 180 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 FTH1P19P0C7X4 201 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 CYP3A7P24462 503 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 U2AF2P26368 475 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNRPF-205ENST00000553192 GNA11P29992 359 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 YWHABP31946 246 aaKnown RBP12.97□□□□□ -0.33
SNRPF-205ENST00000553192 NUCB1Q02818 461 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 SOX4Q06945 474 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-205ENST00000553192 TFDP1Q14186 410 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 TRIM68Q6AZZ1 485 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 PPP4R3CPQ6ZMV5 832 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 RNF19BQ6ZMZ0 732 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 OR2I1PQ8NGU4 316 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
SNRPF-205ENST00000553192 CRISPLD1Q9H336 500 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 PDZD7Q9H5P4 517 aa12.97□□□□□ -0.33
SNRPF-205ENST00000553192 KIF26AQ9ULI4 1882 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-205ENST00000553192 THADAQ6YHU6 1953 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
SNRPF-205ENST00000553192 ANTXRLA6NF34 631 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 J3QKU1 62 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 ZBTB43O43298 467 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 P4HBP07237 508 aaKnown RBP12.96□□□□□ -0.33
SNRPF-205ENST00000553192 ADD1P35611 737 aaKnown RBP12.96□□□□□ -0.33
SNRPF-205ENST00000553192 MCM2P49736 904 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 RUNX3Q13761 415 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 TRIP6Q15654 476 aaKnown RBP12.96□□□□□ -0.33
SNRPF-205ENST00000553192 FBXO43Q4G163 708 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 GPR158Q5T848 1215 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 PEAR1Q5VY43 1037 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-205ENST00000553192 ARMCX6Q7L4S7 300 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 SYT12Q8IV01 421 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 NOSTRINQ8IVI9 506 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 FRMD1Q8N878 549 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 BEST2Q8NFU1 509 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 TSTD1Q8NFU3 115 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 TBCKQ8TEA7 893 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 FNBP1Q96RU3 617 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 EBF3Q9H4W6 596 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 USP20Q9Y2K6 914 aa12.96□□□□□ -0.33
SNRPF-205ENST00000553192 GON4LQ3T8J9 2241 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 SYN3O14994 580 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 SH3BP5O60239 455 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 DKC1O60832 514 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNRPF-205ENST00000553192 EDN1P05305 212 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 DRD1P21728 446 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 WEE1P30291 646 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 PPP2R5CQ13362 524 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
SNRPF-205ENST00000553192 PTPAQ15257 358 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 CTXN3Q4LDR2 81 aa12.95□□□□□ -0.34
SNRPF-205ENST00000553192 EEF1DP3Q658K8 133 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms