RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 RDH13Q8NBN7 331 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 APPL2Q8NEU8 664 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 LNX1Q8TBB1 728 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 SLC22A17Q8WUG5 538 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 TSG101Q99816 390 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 GZF1Q9H116 711 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 NUP62CLQ9H1M0 184 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 CLEC1BQ9P126 229 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 BARX2Q9UMQ3 279 aaPredicted RBP12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
TRAFD1-209ENST00000552896 VCANP13611 3396 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 GLUD1P00367 558 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DLATP10515 647 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 ODC1P11926 461 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 TYMPP19971 482 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 BMP6P22004 513 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 KLRC2P26717 231 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 POLR2BP30876 1174 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 CASP4P49662 377 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 CLDN10P78369 228 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 CAMK4Q16566 473 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 VARS2Q5ST30 1063 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 CEP135Q66GS9 1140 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 ZNF280DQ6N043 979 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 ANKRD54Q6NXT1 300 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 ELMSAN1Q6PJG2 1045 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 USP37Q86T82 979 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 OR5B17Q8NGF7 314 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DHTKD1Q96HY7 919 aaPredicted RBP12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 MKNK1Q9BUB5 465 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 SIX4Q9UIU6 781 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 CD207Q9UJ71 328 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DOCK6Q96HP0 2047 aa12.64□□□□□ -0.39
TRAFD1-209ENST00000552896 DOCK8Q8NF50 2099 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 TTC28Q96AY4 2481 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 H3BQ06 376 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 H7C4K7 107 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 BIN1O00499 593 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SPTLC1O15269 473 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SLC16A3O15427 465 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 MBD3O95983 291 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 CYP11A1P05108 521 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 EPCAMP16422 314 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 HOXB8P17481 243 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 RPL17P18621 184 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 TNNI1P19237 187 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 CCNE1P24864 410 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 CLCN6P51797 869 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 AP3M2P53677 418 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 RBP5P82980 135 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SMAD4Q13485 552 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 MRPL58Q14197 206 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 GPT2Q8TD30 523 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 PLEKHO2Q8TD55 490 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 PARD3BQ8TEW8 1205 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 FAM84AQ96KN4 292 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SENP8Q96LD8 212 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 ASB2Q96Q27 587 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 CLSTN3Q9BQT9 956 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 SFXN1Q9H9B4 322 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 DSEQ9UL01 958 aa12.63□□□□□ -0.39
TRAFD1-209ENST00000552896 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 BDP1A6H8Y1 2624 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 MYH10P35580 1976 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 OBSL1O75147 1896 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 BICDL2A1A5D9 508 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 TRIM49BA6NDI0 452 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 LRRIQ3A6PVS8 624 aaPredicted RBP12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 PPP1R3GB7ZBB8 358 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 CETN3O15182 167 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 TBC1D4O60343 1298 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 AKAP3O75969 853 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 OAZ2O95190 189 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 KRT19P08727 400 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 EPB41P11171 864 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 PSMC2P35998 433 aaKnown RBP12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 KCNQ1P51787 676 aa12.62□□□□□ -0.39
TRAFD1-209ENST00000552896 PMS1P54277 932 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms