RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 MORC3Q14149 939 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CTC1Q2NKJ3 1217 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 EDRF1Q3B7T1 1238 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 RTP2Q5QGT7 225 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 TMEM184AQ6ZMB5 413 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 ANKS3Q6ZW76 656 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 USP37Q86T82 979 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 ADHFE1Q8IWW8 467 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 EFCAB13Q8IY85 973 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 PIK3R5Q8WYR1 880 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CASP10Q92851 521 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 SUSD3Q96L08 255 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 B3GALT6Q96L58 329 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 CLSTN2Q9H4D0 955 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
PTCH1-225ENST00000551845 FNIP2Q9P278 1114 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 DPP7Q9UHL4 492 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 AGAP1Q9UPQ3 857 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 BRWD1Q9NSI6 2320 aa11.47□□□□□ -0.57
PTCH1-225ENST00000551845 FNDC1Q4ZHG4 1894 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-225ENST00000551845 C19orf67A6NJJ6 358 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 I3L4J1 428 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 MAPK13O15264 365 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 C1RP00736 705 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 KRT13P13646 458 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 CCNE1P24864 410 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PSMC2P35998 433 aaKnown RBP11.46□□□□□ -0.57
PTCH1-225ENST00000551845 TAF6P49848 677 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 WNT7BP56706 349 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PSMD5Q16401 504 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 ANKRD40Q6AI12 368 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 LLGL2Q6P1M3 1020 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 ELMSAN1Q6PJG2 1045 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PRSS55Q6UWB4 352 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PALB2Q86YC2 1186 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PRSS33Q8NF86 280 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 POP1Q99575 1024 aaKnown RBP11.46□□□□□ -0.57
PTCH1-225ENST00000551845 NUP62CLQ9H1M0 184 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 MUTYHQ9UIF7 546 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 BACE2Q9Y5Z0 518 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 HCFC2Q9Y5Z7 792 aa11.46□□□□□ -0.57
PTCH1-225ENST00000551845 TCHHQ07283 1943 aa11.46□□□□□ -0.58
PTCH1-225ENST00000551845 BICDL2A1A5D9 508 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 KPNA7A9QM74 516 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 PPP1R3GB7ZBB8 358 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 M0QZQ0 153 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 IKBKBO14920 756 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 LINC01565O15544 149 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 PHACTR2O75167 634 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 AKAP3O75969 853 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 MBD3O95983 291 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 ITGB3P05106 788 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 HOXB8P17481 243 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 RPL17P18621 184 aaKnown RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 POLR2BP30876 1174 aaKnown RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 LTBRP36941 435 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 AARSP49588 968 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 CASP4P49662 377 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 CLCN4P51793 760 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 LRRC63Q05C16 580 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 MYO1EQ12965 1108 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 TRPC3Q13507 836 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 KCNC3Q14003 757 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 MRPL58Q14197 206 aaKnown RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 SV2CQ496J9 727 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 VARS2Q5ST30 1063 aaKnown RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 LMBRD2Q68DH5 695 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 KLHL10Q6JEL2 608 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 INTS8Q75QN2 995 aaKnown RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 TRAPPC11Q7Z392 1133 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 METTL23Q86XA0 190 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 TMEM130Q8N3G9 435 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 LRRC52Q8N7C0 313 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 C1orf127Q8N9H9 656 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 OR5B17Q8NGF7 314 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 TMC2Q8TDI7 906 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 PARD3BQ8TEW8 1205 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 SLC22A17Q8WUG5 538 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 SENP8Q96LD8 212 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 ZNF560Q96MR9 790 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 CLSTN3Q9BQT9 956 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 MKNK1Q9BUB5 465 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 OXCT2Q9BYC2 517 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-225ENST00000551845 DSEQ9UL01 958 aa11.45□□□□□ -0.58
PTCH1-225ENST00000551845 CYB561D2O14569 222 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 PPEF2O14830 753 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 SPTLC1O15269 473 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 OAZ2O95190 189 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 GLUD1P00367 558 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 CST3P01034 146 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-225ENST00000551845 EPB41P11171 864 aaKnown RBP11.44□□□□□ -0.58
PTCH1-225ENST00000551845 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
PTCH1-225ENST00000551845 TYMPP19971 482 aa11.44□□□□□ -0.58
PTCH1-225ENST00000551845 BMP6P22004 513 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms