RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 SNX3O60493 162 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 DNAJC8O75937 253 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 POTEJP0CG39 1038 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 FDX1P10109 184 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 CETPP11597 493 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 KCNA3P22001 575 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 RTP1P59025 263 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 CAV1Q03135 178 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 NBPF12Q5TAG4 269 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 CYP4F22Q6NT55 531 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 HIBCHQ6NVY1 386 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 CRELD2Q6UXH1 353 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 ABHD15Q6UXT9 468 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 RBBP8NLQ8NC74 664 aaPredicted RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 ASAP3Q8TDY4 903 aa13.84□□□□□ -0.19
CACNB3-219ENST00000551544 TARS2Q9BW92 718 aaKnown RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 MRPL47Q9HD33 250 aaKnown RBP13.84□□□□□ -0.19
CACNB3-219ENST00000551544 H0YCG3 227 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 K7ERI5 159 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 PSTPIP1O43586 416 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 KRT10P13645 584 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 HMGCS2P54868 508 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 BACE1P56817 501 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 CLDN10P78369 228 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 MPP2Q14168 576 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 CCNG2Q16589 344 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 XKR3Q5GH77 459 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 SCARA3Q6AZY7 606 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 MIS18BP1Q6P0N0 1132 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 FAM228AQ86W67 206 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 SRRM1Q8IYB3 904 aaKnown RBP13.83□□□□□ -0.19
CACNB3-219ENST00000551544 CCDC89Q8N998 374 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 DEPTORQ8TB45 409 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 FBXO41Q8TF61 875 aa13.83□□□□□ -0.19
CACNB3-219ENST00000551544 TPX2Q9ULW0 747 aaKnown RBP13.83□□□□□ -0.19
CACNB3-219ENST00000551544 SLC8A1P32418 973 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 NOP14P78316 857 aaKnown RBP13.83□□□□□ -0.2
CACNB3-219ENST00000551544 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 OR5B17Q8NGF7 314 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
CACNB3-219ENST00000551544 MSTO1Q9BUK6 570 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 NEU2Q9Y3R4 380 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 NUB1Q9Y5A7 615 aa13.83□□□□□ -0.2
CACNB3-219ENST00000551544 TCF4P15884 667 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 RPL7AP62424 266 aaKnown RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 PTP4A2Q12974 167 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 P3H1Q32P28 736 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 PRAMEF18Q5VWM3 479 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 KATNAL2Q8IYT4 538 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 CCDC63Q8NA47 563 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 SLC12A4Q9UP95 1085 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 USP15Q9Y4E8 981 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 DOCK5Q9H7D0 1870 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 MGRN1O60291 552 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 CLTAP09496 248 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 SUPT20HL2P0C7V6 817 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 GLRA2P23416 452 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 SP2Q02086 613 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 SUPT20HL1Q3ZLR7 823 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 HP1BP3Q5SSJ5 553 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 TRIM72Q6ZMU5 477 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 TBC1D1Q86TI0 1168 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 HGSO14964 777 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 UBOX5O94941 541 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 ATP4AP20648 1035 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 STX2P32856 288 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 ELF3P78545 371 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 ENPEPQ07075 957 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 PLEKHA7Q6IQ23 1121 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 GLIS1Q8NBF1 620 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 REPS2Q8NFH8 660 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 EXD1Q8NHP7 514 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 FEZF2Q8TBJ5 459 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 CDHR1Q96JP9 859 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 RBM15Q96T37 977 aaKnown RBP eCLIP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 CYP39A1Q9NYL5 469 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
CACNB3-219ENST00000551544 SCINQ9Y6U3 715 aa13.82□□□□□ -0.2
CACNB3-219ENST00000551544 NFASCO94856 1347 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 ZSCAN5DPP0CG00 497 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 EZRP15311 586 aaKnown RBP13.81□□□□□ -0.2
CACNB3-219ENST00000551544 NFX1Q12986 1120 aaKnown RBP13.81□□□□□ -0.2
CACNB3-219ENST00000551544 TMED2Q15363 201 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 GNPTABQ3T906 1256 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 PNMA8AQ86V59 439 aaPredicted RBP13.81□□□□□ -0.2
CACNB3-219ENST00000551544 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
CACNB3-219ENST00000551544 BBOF1Q8ND07 529 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 ZNF280CQ8ND82 737 aa13.81□□□□□ -0.2
CACNB3-219ENST00000551544 N4BP2L2Q92802 583 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms