RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 ATG2BQ96BY7 2078 aa12.5□□□□□ -0.41
GPN3-208ENST00000550974 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 INO80B-WBP1J3KQ70 363 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 PTGESO14684 152 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 RRP8O43159 456 aaKnown RBP12.49□□□□□ -0.41
GPN3-208ENST00000550974 GAS7O60861 476 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 PRAMEF12O95522 483 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 ARF4P18085 180 aaPredicted RBP12.49□□□□□ -0.41
GPN3-208ENST00000550974 MCM2P49736 904 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 AMPD2Q01433 879 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 PEAR1Q5VY43 1037 aaPredicted RBP12.49□□□□□ -0.41
GPN3-208ENST00000550974 TRIM68Q6AZZ1 485 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 ANO5Q75V66 913 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 GLRX5Q86SX6 157 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 FMNL3Q8IVF7 1028 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 GALNT15Q8N3T1 639 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 DEFB119Q8N690 84 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 CRYGNQ8WXF5 182 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 GJA10Q969M2 543 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 SPACA7Q96KW9 195 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 SEMA4CQ9C0C4 833 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 CXCL16Q9H2A7 254 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 HPS4Q9NQG7 708 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 PTPRBP23467 1997 aa12.49□□□□□ -0.41
GPN3-208ENST00000550974 CFAP46Q8IYW2 2715 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 SYPP08247 313 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 HOXD12P35452 270 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 P2RY2P41231 377 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 BRCC3P46736 316 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 NPEPPSP55786 919 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 NBR1Q14596 966 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 SLC27A1Q6PCB7 646 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
GPN3-208ENST00000550974 NCOA7Q8NI08 942 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 EZH1Q92800 747 aaPredicted RBP12.48□□□□□ -0.41
GPN3-208ENST00000550974 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
GPN3-208ENST00000550974 LRRC3Q9BY71 257 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 SMG9Q9H0W8 520 aaKnown RBP12.48□□□□□ -0.41
GPN3-208ENST00000550974 ATXN3LQ9H3M9 355 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 DIAPH3Q9NSV4 1193 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 KCNK4Q9NYG8 393 aa12.48□□□□□ -0.41
GPN3-208ENST00000550974 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
GPN3-208ENST00000550974 ASAP2O43150 1006 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 B4GALT5O43286 388 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TLX3O43711 291 aaPredicted RBP12.47□□□□□ -0.41
GPN3-208ENST00000550974 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 CLCNKBP51801 687 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 ANTXR2P58335 489 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 CXADRP78310 365 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.41
GPN3-208ENST00000550974 NAB2Q15742 525 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 C2orf27AQ580R0 203 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 LRCH2Q5VUJ6 765 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TPGS2Q68CL5 300 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 LMBRD2Q68DH5 695 aaPredicted RBP12.47□□□□□ -0.41
GPN3-208ENST00000550974 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 FERMT3Q86UX7 667 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TMC8Q8IU68 726 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TEX2Q8IWB9 1127 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 SETD7Q8WTS6 366 aaKnown RBP12.47□□□□□ -0.41
GPN3-208ENST00000550974 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 FAM83CQ9BQN1 747 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 TEKT3Q9BXF9 490 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 PCOLCE2Q9UKZ9 415 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 SPTA1P02549 2419 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 PIEZO2Q9H5I5 2752 aa12.47□□□□□ -0.41
GPN3-208ENST00000550974 CCDC69A6NI79 296 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 TMEM189-UBE2V1I3L0A0 370 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 MSH4O15457 936 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 GJB3O75712 270 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 ATXN1LP0C7T5 689 aaKnown RBP12.46□□□□□ -0.41
GPN3-208ENST00000550974 HLA-EP13747 358 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 ARSAP15289 507 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 PTENP60484 403 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 SEMG2Q02383 582 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 LY6DQ14210 128 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 AMHR2Q16671 573 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 SPDYCQ5MJ68 293 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 TMTC3Q6ZXV5 915 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 EXOC4Q96A65 974 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 LENG9Q96B70 501 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 RIT2Q99578 217 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 PRDM16Q9HAZ2 1276 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 TOR4AQ9NXH8 423 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 IL17BQ9UHF5 180 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 FBXL5Q9UKA1 691 aa12.46□□□□□ -0.41
GPN3-208ENST00000550974 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.42
GPN3-208ENST00000550974 MUC22E2RYF6 1773 aaPredicted RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms