RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 NNTQ13423 1086 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 EDRF1Q3B7T1 1238 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 BBS9Q3SYG4 887 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 ITIH5Q86UX2 942 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FIBCD1Q8N539 461 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FBXO32Q969P5 355 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 PARVAQ9NVD7 372 aa12.87□□□□□ -0.35
NR4A1-215ENST00000550557 FOXP2O15409 715 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ACO1P21399 889 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CTNNB1P35222 781 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 HEATR6Q6AI08 1181 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 VSIG10LQ86VR7 867 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 PDIK1LQ8N165 341 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 BHMTQ93088 406 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 EDEM3Q9BZQ6 932 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 SLC7A5P2Q9GIP4 190 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 FGFR4P22455 802 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CDH6P55285 790 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ZNF280AP59817 542 aaPredicted RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 SDCCAG8Q86SQ7 713 aaPredicted RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ZNF410Q86VK4 478 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 NUP85Q9BW27 656 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 POC1B-GALNT4F8VUJ3 575 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 FZD9O00144 591 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 AP1G2O75843 785 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 PCK1P35558 622 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 KPNA2P52292 529 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 FAM171A1Q5VUB5 890 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 HEMGNQ9BXL5 484 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ATP1A1P05023 1023 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 DEUP1Q05D60 604 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
NR4A1-215ENST00000550557 SLC27A1Q6PCB7 646 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 CYP2W1Q8TAV3 490 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 PBKQ96KB5 322 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
NR4A1-215ENST00000550557 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 SOCS7O14512 581 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 TLL1O43897 1013 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 AXLP30530 894 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 MAP2K2P36507 400 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 IFNAR2P48551 515 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 AP1B1Q10567 949 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 TRIP13Q15645 432 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 PCGF5Q86SE9 256 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 GSPT2Q8IYD1 628 aaKnown RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 ANKRD42Q8N9B4 389 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 APEX2Q9UBZ4 518 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 FAM50BQ9Y247 325 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 TARSL2A2RTX5 802 aaKnown RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 SLC11A2P49281 568 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 SH3BGRP55822 239 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 YWHAHQ04917 246 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 CDH18Q13634 790 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 ZNF558Q96NG5 402 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 MKNK1Q9BUB5 465 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 KCND1Q9NSA2 647 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 C7orf61Q8IZ16 206 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 CHP1Q99653 195 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 DDX23Q9BUQ8 820 aaKnown RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 MAP3K13O43283 966 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 ZFXP17010 805 aaPredicted RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 PAPOLAP51003 745 aaKnown RBP12.85□□□□□ -0.35
NR4A1-215ENST00000550557 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 SLC7A14Q8TBB6 771 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 MCUR1Q96AQ8 359 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 RILPQ96NA2 401 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 VCXQ9H320 206 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 USH1CQ9Y6N9 552 aa12.85□□□□□ -0.35
NR4A1-215ENST00000550557 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 TCHHQ07283 1943 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 AOC2O75106 756 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 NCAM1P13591 858 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 TPD52P55327 224 aaPredicted RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 FSTL1Q12841 308 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 GOLGA7BQ2TAP0 167 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 EFHC1Q5JVL4 640 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 GKAP1Q5VSY0 366 aaPredicted RBP12.84□□□□□ -0.35
NR4A1-215ENST00000550557 NXNQ6DKJ4 435 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 MIB1Q86YT6 1006 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 MTMR14Q8NCE2 650 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 BCAP29Q9UHQ4 241 aa12.84□□□□□ -0.35
NR4A1-215ENST00000550557 LHX1P48742 406 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms