RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 UCP3P55916 312 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 HTRA4P83105 476 aaPredicted RBP6.8□□□□□ -1.32
HCFC2-204ENST00000550335 MXRA7P84157 204 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 KIF22Q14807 665 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 TAF5Q15542 800 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 ZACNQ401N2 412 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 RALYLQ86SE5 291 aaKnown RBP6.8□□□□□ -1.32
HCFC2-204ENST00000550335 XYLT1Q86Y38 959 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 SLC17A8Q8NDX2 589 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 RAPGEF4Q8WZA2 1011 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 GPHA2Q96T91 129 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 SORBS1Q9BX66 1292 aaKnown RBP6.8□□□□□ -1.32
HCFC2-204ENST00000550335 ZFP64Q9NPA5 681 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 RRN3Q9NYV6 651 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 HDAC5Q9UQL6 1122 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 TMX2Q9Y320 296 aa6.8□□□□□ -1.32
HCFC2-204ENST00000550335 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 LGALS16A8MUM7 142 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 M0QYG6 137 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ETV2O00321 342 aaPredicted RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ARHGAP6O43182 974 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 SLC43A1O75387 559 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 NDST3O95803 873 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ZNF135P52742 658 aaPredicted RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ITGA8P53708 1063 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 PRKG1Q13976 671 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 SSPNQ14714 243 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 TIGD6Q17RP2 521 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 FAM214AQ32MH5 1076 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 GAGE13Q4V321 117 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 AMOTQ4VCS5 1084 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ARTNQ5T4W7 220 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 EMC10Q5UCC4 262 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 DCAF12L1Q5VU92 463 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ANKS6Q68DC2 871 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 OTUD7BQ6GQQ9 843 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 SEM1Q6ZVN7 128 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 USP37Q86T82 979 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 MICU3Q86XE3 530 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 KLHL36Q8N4N3 616 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 NLGN4YQ8NFZ3 816 aaPredicted RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 IPO4Q8TEX9 1081 aaKnown RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ZC3H10Q96K80 434 aaKnown RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 PHACTR3Q96KR7 559 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 RMDN3Q96TC7 470 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 STK33Q9BYT3 514 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 CHST8Q9H2A9 424 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 A1CFQ9NQ94 594 aaKnown RBP6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ITM2CQ9NQX7 267 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 SAGE1Q9NXZ1 904 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 DACT1Q9NYF0 836 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 TBC1D30Q9Y2I9 924 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 GPR52Q9Y2T5 361 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 ABCC9O60706 1549 aa6.79□□□□□ -1.32
HCFC2-204ENST00000550335 FAM234BA2RU67 622 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 GOLGA6L3A6NEY3 463 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 M0R3H8 397 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 TRIM38O00635 465 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 B4GALT4O60513 344 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 STC2O76061 302 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 POMCP01189 267 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 SNRPA1P09661 255 aaKnown RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 HSD3B1P14060 373 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 JUNBP17275 347 aaPredicted RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 PPFIA1Q13136 1202 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 POSTNQ15063 836 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 ZNF827Q17R98 1081 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 RNF151Q2KHN1 245 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 TEX19Q8NA77 164 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 FAM46DQ8NEK8 389 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 OR10H5Q8NGA6 315 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 OR56A3Q8NH54 315 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 IPCEF1Q8WWN9 437 aaPredicted RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 RUBCNQ92622 972 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 FAM167BQ9BTA0 163 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 NDC1Q9BTX1 674 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 IMPG2Q9BZV3 1241 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 MS4A7Q9GZW8 240 aaPredicted RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 TMX4Q9H1E5 349 aaPredicted RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 MAGEH1Q9H213 219 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 KCNH6Q9H252 994 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 AS3MTQ9HBK9 375 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 IL23AQ9NPF7 189 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 TERF2IPQ9NYB0 399 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 JKAMPQ9P055 326 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 ADAM29Q9UKF5 820 aa6.78□□□□□ -1.32
HCFC2-204ENST00000550335 CNOT6Q9ULM6 557 aaKnown RBP6.78□□□□□ -1.32
HCFC2-204ENST00000550335 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 AQP12BA6NM10 295 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 RAB27BO00194 218 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 HNRNPDLO14979 420 aaKnown RBP6.77□□□□□ -1.33
HCFC2-204ENST00000550335 PIP5K1BO14986 540 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 VPS4BO75351 444 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 AGFG2O95081 481 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 PYGLP06737 847 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 DHRS4L1P0CG22 281 aa6.77□□□□□ -1.33
HCFC2-204ENST00000550335 SLC6A4P31645 630 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms