RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 LCA5Q86VQ0 697 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SLFN12Q8IYM2 578 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SH2D3AQ9BRG2 576 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 PARVGQ9HBI0 331 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 LGALS13Q9UHV8 139 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 ZMYM2Q9UBW7 1377 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 MEI4A8MW99 385 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 ANPEPP15144 967 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 SERPINB6P35237 376 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 AP2B1P63010 937 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 COG7P83436 770 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 CAV1Q03135 178 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 PTK6Q13882 451 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 RHBDF2Q6PJF5 856 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.8□□□□□ -0.36
VDR-208ENST00000550325 SLC26A7Q8TE54 656 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 PYDC1Q8WXC3 89 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 ECSITQ9BQ95 431 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 IQCGQ9H095 443 aaKnown RBP12.8□□□□□ -0.36
VDR-208ENST00000550325 SAR1AQ9NR31 198 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 ZNF212Q9UDV6 495 aa12.8□□□□□ -0.36
VDR-208ENST00000550325 FAM237BA0A1B0GVD1 139 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 DDX39AO00148 427 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 FCHO1O14526 889 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ATP2A1O14983 1001 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 LDHCP07864 332 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 KRT10P13645 584 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ARSEP51690 589 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ALDH18A1P54886 795 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 GSTO1P78417 241 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ARHGAP4P98171 946 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 FAM182AQ5T1J6 154 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 RIPOR1Q6ZS17 1223 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 CPA5Q8WXQ8 436 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 SHCBP1LQ9BZQ2 653 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 AGPAT3Q9NRZ7 376 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 IKBKGQ9Y6K9 419 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 KIF22Q14807 665 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 GRAMD1BQ3KR37 738 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 MARK2Q7KZI7 788 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 NME8Q8N427 588 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 OLIG1Q8TAK6 271 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 IFT43Q96FT9 208 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ZNF652Q9Y2D9 606 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 K7ENM7 598 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 RNASEH1O60930 286 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 GYS1P13807 737 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ATP6V1B1P15313 513 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 BGNP21810 368 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 SSTR1P30872 391 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 MED21Q13503 144 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 RASA2Q15283 850 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 LPCAT4Q643R3 524 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 RINT1Q6NUQ1 792 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ZC3H3Q8IXZ2 948 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 FBXO27Q8NI29 283 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ACSF2Q96CM8 615 aaPredicted RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 FHDC1Q9C0D6 1143 aaPredicted RBP12.79□□□□□ -0.36
VDR-208ENST00000550325 ZBTB21Q9ULJ3 1066 aa12.79□□□□□ -0.36
VDR-208ENST00000550325 ECE2O60344 883 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
VDR-208ENST00000550325 IVDP26440 423 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 RASA3Q14644 834 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 SCUBE1Q8IWY4 988 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 GLIS1Q8NBF1 620 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 MTBPQ96DY7 904 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 OLFM3Q96PB7 478 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 FAM111AQ96PZ2 611 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 ZNF711Q9Y462 761 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 TNS2Q63HR2 1409 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 FSCN2O14926 492 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 RPA1P27694 616 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 MAN1A1P33908 653 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 CMPK2Q5EBM0 449 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 STXBP4Q6ZWJ1 553 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 PASD1Q8IV76 773 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 CYP4F11Q9HBI6 524 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 FRMPD4Q14CM0 1322 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 DOCK2Q92608 1830 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 SGK1O00141 431 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 SORBS3O60504 671 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 VAV1P15498 845 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 CDK7P50613 346 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 INHBCP55103 352 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 ARL4CP56559 192 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 DYNLT1P63172 113 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 MMEL1Q495T6 779 aa12.78□□□□□ -0.36
VDR-208ENST00000550325 RAPH1Q70E73 1250 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms