RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 HAPLN2Q9GZV7 340 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 CHRDQ9H2X0 955 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF334Q9HCZ1 680 aaPredicted RBP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 AFF4Q9UHB7 1163 aaKnown RBP13.74□□□□□ -0.21
LETMD1-222ENST00000550274 STK24Q9Y6E0 443 aa13.74□□□□□ -0.21
LETMD1-222ENST00000550274 GREB1Q4ZG55 1949 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 TOM1L1O75674 476 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 CXCL8P10145 99 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 CPB1P15086 417 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 PSMC3P17980 439 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 TGM1P22735 817 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 TEAD2Q15562 447 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 ELMOD1Q8N336 334 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 TMEM161BQ8NDZ6 487 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 APPL2Q8NEU8 664 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 ZSCAN18Q8TBC5 510 aaPredicted RBP13.73□□□□□ -0.21
LETMD1-222ENST00000550274 IRF7Q92985 503 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 ZNF512Q96ME7 567 aaPredicted RBP13.73□□□□□ -0.21
LETMD1-222ENST00000550274 NTPCRQ9BSD7 190 aaKnown RBP13.73□□□□□ -0.21
LETMD1-222ENST00000550274 CRISPLD1Q9H336 500 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 YIPF1Q9Y548 306 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 TIMM13Q9Y5L4 95 aaPredicted RBP13.73□□□□□ -0.21
LETMD1-222ENST00000550274 PIAS3Q9Y6X2 628 aa13.73□□□□□ -0.21
LETMD1-222ENST00000550274 CNOT1A5YKK6 2376 aaKnown RBP13.72□□□□□ -0.21
LETMD1-222ENST00000550274 ARNTLO00327 626 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 MAN2B1O00754 1011 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
LETMD1-222ENST00000550274 PLS3P13797 630 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 PRPHP41219 470 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 STRN3Q13033 797 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 ZRSR1Q15695 479 aaKnown RBP13.72□□□□□ -0.21
LETMD1-222ENST00000550274 BEST2Q8NFU1 509 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 SHKBP1Q8TBC3 707 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 SPIRE2Q8WWL2 714 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 FAM3CQ92520 227 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 RSPRY1Q96DX4 576 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 PNMA5Q96PV4 448 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 LRRC3Q9BY71 257 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 TRPV4Q9HBA0 871 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 PARD6AQ9NPB6 346 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 TRPV5Q9NQA5 729 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 ASAH2Q9NR71 780 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.72□□□□□ -0.21
LETMD1-222ENST00000550274 LAMA1P25391 3075 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 MYO16Q9Y6X6 1858 aa13.72□□□□□ -0.21
LETMD1-222ENST00000550274 TTC26A0AVF1 554 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 HEPACAM2A8MVW5 462 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 M0QZQ0 153 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 LAD1O00515 517 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 LRPAP1P30533 357 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 TNFSF9P41273 254 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.21
LETMD1-222ENST00000550274 GUCY2FP51841 1108 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 YWHAHQ04917 246 aaPredicted RBP13.71□□□□□ -0.21
LETMD1-222ENST00000550274 MCL1Q07820 350 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 GAS6Q14393 721 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 ZBTB6Q15916 424 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 LPAL2Q16609 132 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 HYIQ5T013 277 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 STXBP5Q5T5C0 1151 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 ZPBP2Q6X784 338 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 DTHD1Q6ZMT9 781 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 TMC8Q8IU68 726 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 LEMD2Q8NC56 503 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 DEPDC1BQ8WUY9 529 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
LETMD1-222ENST00000550274 PLIN2Q99541 437 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 KIF2CQ99661 725 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 TIPINQ9BVW5 301 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 FAM126AQ9BYI3 521 aaPredicted RBP13.71□□□□□ -0.21
LETMD1-222ENST00000550274 DNAJC25Q9H1X3 360 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 MAFFQ9ULX9 164 aa13.71□□□□□ -0.21
LETMD1-222ENST00000550274 NPHP3-ACAD11A0A0J9YXS1 232 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 A0A1W2PRU2 124 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 PPEF2O14830 753 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 ZNF263O14978 683 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 CLDN3O15551 220 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 OAZ2O95190 189 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 NEFLP07196 543 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 CHRNB1P11230 501 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 CCNE1P24864 410 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 MARCKSP29966 332 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-222ENST00000550274 ATXN1P54253 815 aaKnown RBP13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SLC12A3P55017 1021 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SATB1Q01826 763 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 DUSP4Q13115 394 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 WDR44Q5JSH3 913 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 GPIHBP1Q8IV16 184 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
LETMD1-222ENST00000550274 GPR161Q8N6U8 529 aaKnown RBP13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
LETMD1-222ENST00000550274 SECISBP2LQ93073 1101 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms