RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 OVOS1Q6IE37 1185 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 STXBP4Q6ZWJ1 553 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 DYMQ7RTS9 669 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 LRRC15Q8TF66 581 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 BORCS6Q96GS4 357 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZNF396Q96N95 335 aaPredicted RBP11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 ACCSQ96QU6 501 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 OSBPL6Q9BZF3 934 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 SEMA4AQ9H3S1 761 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 MRPL44Q9H9J2 332 aaKnown RBP11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 HCFC1R1Q9NWW0 138 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 CA14Q9ULX7 337 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 MTMR6Q9Y217 621 aa11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 MTCL1Q9Y4B5 1905 aaKnown RBP11.8□□□□□ -0.52
VTI1BP3-201ENST00000550220 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 PIRO00625 290 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 PI15O43692 258 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 GFRA3O60609 400 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 IL18RAPO95256 599 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 SEC24AO95486 1093 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 FGF19O95750 216 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ODC1P11926 461 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 STAT6P42226 847 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 MAGEA9P43362 315 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ALDH1A3P47895 512 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 EPHB3P54753 998 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 AMPD3Q01432 767 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 SPAG1Q07617 926 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 SLC44A4Q53GD3 710 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 C9orf57Q5W0N0 161 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 JADE1Q6IE81 842 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 METTL23Q86XA0 190 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 THEM5Q8N1Q8 247 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 CACTINQ8WUQ7 758 aaKnown RBP11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 POMGNT1Q8WZA1 660 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 E2F7Q96AV8 911 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ELSPBP1Q96BH3 223 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 SENP8Q96LD8 212 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 RPP25Q9BUL9 199 aaKnown RBP11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 TMEM206Q9H813 350 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZFP14Q9HCL3 533 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ASAH2Q9NR71 780 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 OLFML3Q9NRN5 406 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 MRPS17Q9Y2R5 130 aaKnown RBP11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 ASB3Q9Y575 518 aa11.79□□□□□ -0.52
VTI1BP3-201ENST00000550220 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ANO9A1A5B4 782 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 MYMKA6NI61 221 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 KIAA0391O15091 583 aaKnown RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 NCAM2O15394 837 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PPP6R2O75170 966 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PPP1R37O75864 691 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PNPLA4P41247 253 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 NASPP49321 788 aaPredicted RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 TUFMP49411 452 aaKnown RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ACOT2P49753 483 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 EPHA5P54756 1037 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 TWF1Q12792 350 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 STK38Q15208 465 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ANGPT1Q15389 498 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PRSS36Q5K4E3 855 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ZBTB41Q5SVQ8 909 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 L1TD1Q5T7N2 865 aaKnown RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 SLC39A4Q6P5W5 647 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 USP49Q70CQ1 688 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ITIH5Q86UX2 942 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 CCDC65Q8IXS2 484 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 SYCP3Q8IZU3 236 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 C2orf15Q8WU43 125 aaKnown RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 DNASE1L2Q92874 299 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 NKD2Q969F2 451 aaPredicted RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 SNX21Q969T3 373 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 MCRS1Q96EZ8 462 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 CLIC6Q96NY7 704 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 STRA6Q9BX79 667 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 BCO2Q9BYV7 579 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 CUEDC2Q9H467 287 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PTPRZ1P23471 2315 aaPredicted RBP11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 PLXNA3P51805 1871 aa11.78□□□□□ -0.52
VTI1BP3-201ENST00000550220 ANKRD63C9JTQ0 380 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 GCNT3O95395 438 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 CYP11A1P05108 521 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 IDEP14735 1019 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 GARTP22102 1010 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 TAF6P49848 677 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 SNW1Q13573 536 aaKnown RBP11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 MLF2Q15773 248 aaPredicted RBP11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 CENPPQ6IPU0 288 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 ZC3H14Q6PJT7 736 aaKnown RBP11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 RNF19BQ6ZMZ0 732 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
VTI1BP3-201ENST00000550220 PJA1Q8NG27 643 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms